RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 EMC4Q5J8M3 183 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 LRRC38Q5VT99 294 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 ERAP2Q6P179 960 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 Q6ZSR6 202 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 VSIG1Q86XK7 387 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 LRRC49Q8IUZ0 686 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 RHOT1Q8IXI2 618 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 BBS5Q8N3I7 341 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 UHMK1Q8TAS1 419 aaKnown RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 NSMCE1Q8WV22 266 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 ASB12Q8WXK4 309 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 MAML1Q92585 1016 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 BMFQ96LC9 184 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 LENG8Q96PV6 779 aaPredicted RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 RNF157Q96PX1 679 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 NUDCD1Q96RS6 583 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 TTC1Q99614 292 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 DTLQ9NZJ0 730 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 HYOU1Q9Y4L1 999 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 PCDHA13Q9Y5I0 950 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 HS3ST3A1Q9Y663 406 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 IGF2RP11717 2491 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 COL5A1P20908 1838 aaPredicted RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 MAP1BP46821 2468 aaKnown RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 CELSR3Q9NYQ7 3312 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 LRRK1Q38SD2 2015 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 MATN3O15232 486 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 HTRA2O43464 458 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 SOCS5O75159 536 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TM7SF2O76062 418 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 NDUFA10O95299 355 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TRIM16O95361 564 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TOP3BO95985 862 aaKnown RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 C6P13671 934 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TNNT1P13805 278 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 RABIFP47224 123 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 PFN3P60673 137 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 SLC10A2Q12908 348 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TRAF2Q12933 501 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 RALGDSQ12967 914 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 PDE1CQ14123 709 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 FZD2Q14332 565 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 IRF4Q15306 451 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TPRG1LQ5T0D9 272 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 MARC1Q5VT66 337 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 SLC9A4Q6AI14 798 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TIGD7Q6NT04 549 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 C11orf63Q6NUN7 778 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 PAQR3Q6TCH7 311 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 RAD9BQ6WBX8 426 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 DPPA4Q7L190 304 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 KANSL1Q7Z3B3 1105 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 ATG4DQ86TL0 474 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 PARGQ86W56 976 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TMTC1Q8IUR5 882 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TEX26Q8N6G2 289 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 PAF1Q8N7H5 531 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 PLD5Q8N7P1 536 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 PNPLA1Q8N8W4 532 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TP53I13Q8NBR0 393 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 CHTF18Q8WVB6 975 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 SEC14L1Q92503 715 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 FATE1Q969F0 183 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 CENPTQ96BT3 561 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 HDAC11Q96DB2 347 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 ZNF830Q96NB3 372 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TSGA13Q96PP4 275 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 ANP32EQ9BTT0 268 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 BOCQ9BWV1 1114 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 C1QTNF7Q9BXJ2 289 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 POLR1EQ9GZS1 481 aaKnown RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 GOLPH3Q9H4A6 298 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 IFT22Q9H7X7 185 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 NOD2Q9HC29 1040 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 MBNL1Q9NR56 388 aaKnown RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 DDX56Q9NY93 547 aaKnown RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 FTSJ1Q9UET6 329 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 SRPK3Q9UPE1 567 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 REXO2Q9Y3B8 237 aaKnown RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 TTLL3Q9Y4R7 772 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 EPN1Q9Y6I3 576 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-205ENST00000419378 USP24Q9UPU5 2620 aa6.93□□□□□ -1.3
HMGN1-205ENST00000419378 ARID1BQ8NFD5 2236 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ZZEF1O43149 2961 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 A0A0A6YYK5 440 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 SPTY2D1-AS1A0A0U1RR47 76 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 A0A1W2PQ67 120 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 CFAP69A5D8W1 941 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 APOL1O14791 398 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 TNFSF14O43557 240 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 PSTPIP1O43586 416 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 BRINP1O60477 761 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 FKBP9O95302 570 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 PGLSO95336 258 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 IPO7O95373 1038 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 MPOP05164 745 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 HLA-DQB2P05538 268 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms