RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 B4E171 279 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A9O60656 530 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 ZNF189O75820 626 aaPredicted RBP24.58■■□□□ 1.53
HLA-C-204ENST00000415537 PYGMP11217 842 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A6P19224 532 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A1P22309 533 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A4P22310 534 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A3P35503 534 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 TSPAN7P41732 249 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 RAB15P59190 212 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 KIF5AQ12840 1032 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 TMEM26Q6ZUK4 368 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 PEX26Q7Z412 305 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 ARHGAP22Q7Z5H3 698 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 GAS2L3Q86XJ1 694 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 SYCE1Q8N0S2 351 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UBL4BQ8N7F7 174 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 TTC9Q92623 222 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 ALG3Q92685 438 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 LRRC45Q96CN5 670 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 SGF29Q96ES7 293 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 PPP1R2P1Q96PQ5 205 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A7Q9HAW7 530 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A10Q9HAW8 530 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 UGT1A8Q9HAW9 530 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 B3GALT1Q9Y5Z6 326 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 GOLGA6L9A6NEM1 432 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 KCNJ13O60928 360 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 AMD1P17707 334 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 LPOP22079 712 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-204ENST00000415537 PSMB4P28070 264 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 SLC19A1P41440 591 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 ATP1A2P50993 1020 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 DRG2P55039 364 aaKnown RBP24.57■■□□□ 1.52
HLA-C-204ENST00000415537 SRSF6Q13247 344 aaKnown RBP24.57■■□□□ 1.52
HLA-C-204ENST00000415537 TAF1AQ15573 450 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-204ENST00000415537 AADACL2Q6P093 401 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 ABRAXAS1Q6UWZ7 409 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 WASH2PQ6VEQ5 465 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 VASH2Q86V25 355 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 JPH3Q8WXH2 748 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-204ENST00000415537 CXorf40BQ96DE9 158 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 WASH6PQ9NQA3 447 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 POT1Q9NUX5 634 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 ZNF624Q9P2J8 865 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-204ENST00000415537 TRIM10Q9UDY6 481 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 ARL5AQ9Y689 179 aa24.57■■□□□ 1.52
HLA-C-204ENST00000415537 C1QL1O75973 258 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 UBXN7O94888 489 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 HALP42357 657 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 AGAP9Q5VTM2 703 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 RANBP10Q6VN20 620 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 C11orf96Q7Z7L8 435 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 AMZ2Q86W34 360 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 DDHD1Q8NEL9 900 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 CCDC110Q8TBZ0 833 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 ZNF398Q8TD17 642 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 PMEPA1Q969W9 287 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 SPATA13Q96N96 652 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 TEFMQ96QE5 360 aaKnown RBP24.56■■□□□ 1.52
HLA-C-204ENST00000415537 APOL2Q9BQE5 337 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 GORASP1Q9BQQ3 440 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 IMPACTQ9P2X3 320 aa24.56■■□□□ 1.52
HLA-C-204ENST00000415537 C5orf60A6NFR6 353 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 GPR39O43194 453 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 TYRP1P17643 537 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 MSH3P20585 1137 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 AKT1P31749 480 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 PTPRCAPQ14761 206 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 GPRC6AQ5T6X5 926 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 TMEM220Q6QAJ8 160 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 RBM12BQ8IXT5 1001 aaKnown RBP24.55■■□□□ 1.52
HLA-C-204ENST00000415537 IL22RA1Q8N6P7 574 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 RASGEF1AQ8N9B8 481 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 TTC13Q8NBP0 860 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 OR4K2Q8NGD2 314 aa24.55■■□□□ 1.52
HLA-C-204ENST00000415537 DNMT3AQ9Y6K1 912 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-204ENST00000415537 ZNF106Q9H2Y7 1883 aaKnown RBP24.55■■□□□ 1.52
HLA-C-204ENST00000415537 PRR19A6NJB7 356 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 OR2AG2A6NM03 316 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 OR52A4PA6NMU1 304 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 MIF4GDA9UHW6 222 aaKnown RBP24.54■■□□□ 1.52
HLA-C-204ENST00000415537 POP7O75817 140 aaKnown RBP24.54■■□□□ 1.52
HLA-C-204ENST00000415537 PRAMEF1O95521 474 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 CRTAMO95727 393 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 BRAFP15056 766 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 ADRA1AP35348 466 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 ARSDP51689 593 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 PDE1BQ01064 536 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 MC2RQ01718 297 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 LY6DQ14210 128 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 ANKS6Q68DC2 871 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 CEACAM20Q6UY09 585 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 TMEM139Q8IV31 216 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 BMPERQ8N8U9 685 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 SPC24Q8NBT2 197 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 SMOXQ9NWM0 555 aa24.54■■□□□ 1.52
HLA-C-204ENST00000415537 PACSIN2Q9UNF0 486 aaPredicted RBP24.54■■□□□ 1.52
HLA-C-204ENST00000415537 ATMQ13315 3056 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms