RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CCDC162PA2VCL2 907 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 GRID2O43424 1007 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 ECI2O75521 394 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 CAPNS1P04632 268 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 SMIM18P0DKX4 95 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 LAMP2P13473 410 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 ATP5F1P24539 256 aaPredicted RBP11.46□□□□□ -0.57
RFFL-205ENST00000415395 EPHA3P29320 983 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 PSMD8P48556 350 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 STC1P52823 247 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 NAGLUP54802 743 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 PTPN5P54829 565 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 ST8SIA6P61647 398 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 POLR2LP62875 67 aaKnown RBP11.46□□□□□ -0.57
RFFL-205ENST00000415395 PEX6Q13608 980 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 RUNX3Q13761 415 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 AARS2Q5JTZ9 985 aaKnown RBP11.46□□□□□ -0.57
RFFL-205ENST00000415395 BRAT1Q6PJG6 821 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 DPY19L3Q6ZPD9 716 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 USP45Q70EL2 814 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 C12orf40Q86WS4 652 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 TICAM1Q8IUC6 712 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 DRAXINQ8NBI3 349 aaPredicted RBP11.46□□□□□ -0.57
RFFL-205ENST00000415395 OR2A12Q8NGT7 310 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 OR6K2Q8NGY2 324 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 B4GALNT2Q8NHY0 566 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 FAM81AQ8TBF8 368 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 AGR3Q8TD06 166 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 PBXIP1Q96AQ6 731 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 VOPP1Q96AW1 172 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 TSPAN17Q96FV3 270 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 MPP4Q96JB8 637 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 CATSPER2Q96P56 530 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 HEPHQ9BQS7 1158 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 OSBPL11Q9BXB4 747 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 C1QTNF1Q9BXJ1 281 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 NUF2Q9BZD4 464 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 GPR63Q9BZJ6 419 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 WDR55Q9H6Y2 383 aaPredicted RBP11.46□□□□□ -0.57
RFFL-205ENST00000415395 ELOVL2Q9NXB9 296 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 IL17CQ9P0M4 197 aa11.46□□□□□ -0.57
RFFL-205ENST00000415395 TSPAN11A1L157 253 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 AURKAO14965 403 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 SORBS2O94875 1100 aaKnown RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 S1PR4O95977 384 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 CHRNGP07510 517 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 XRCC1P18887 633 aaPredicted RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 CREB5Q02930 508 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 PTPRNQ16849 979 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 MAP7D1Q3KQU3 841 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 GDPD4Q6W3E5 623 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 RBM44Q6ZP01 1051 aaKnown RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 Q6ZVU0 165 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 CBARPQ8N350 705 aaPredicted RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 PAF1Q8N7H5 531 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 EZH1Q92800 747 aaPredicted RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 EME1Q96AY2 570 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 SCRN2Q96FV2 425 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 MAELQ96JY0 434 aaKnown RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 ZFYVE19Q96K21 471 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 MSLNLQ96KJ4 702 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 CNBD2Q96M20 576 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 MCCC1Q96RQ3 725 aaPredicted RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 TRIM15Q9C019 465 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 CIPCQ9C0C6 399 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 ZDHHC6Q9H6R6 413 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 COPS7BQ9H9Q2 264 aaPredicted RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 ZFYVE1Q9HBF4 777 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 POLR3BQ9NW08 1133 aaPredicted RBP11.46□□□□□ -0.58
RFFL-205ENST00000415395 CLDND1Q9NY35 253 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 MTCH2Q9Y6C9 303 aa11.46□□□□□ -0.58
RFFL-205ENST00000415395 TK2O00142 265 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 TRIM24O15164 1050 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 C8BP07358 591 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 SLC26A3P40879 764 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 GRIA2P42262 883 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 TTPAP49638 278 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 FAM83EQ2M2I3 478 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 ZDHHC20Q5W0Z9 365 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 FAM45BPQ6NSW5 357 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 CNSTQ6PJW8 725 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 HACD2Q6Y1H2 254 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 ATG14Q6ZNE5 492 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 TPRG1Q6ZUI0 275 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 NUDT18Q6ZVK8 323 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 SLC22A9Q8IVM8 553 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 FSTL5Q8N475 847 aaPredicted RBP11.45□□□□□ -0.58
RFFL-205ENST00000415395 TERB1Q8NA31 727 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 FAM45AQ8TCE6 357 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 CYB5D2Q8WUJ1 264 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.45□□□□□ -0.58
RFFL-205ENST00000415395 NMD3Q96D46 503 aaKnown RBP11.45□□□□□ -0.58
RFFL-205ENST00000415395 ELMO2Q96JJ3 720 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 TRMOQ9BU70 441 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 SLC25A23Q9BV35 468 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 POPDC3Q9HBV1 291 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 ADA2Q9NZK5 511 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 XPR1Q9UBH6 696 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms