RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CNTN5O94779 1100 aa2.57□□□□□ -2
MCF2-204ENST00000414978 OPN1MWP04001 364 aa2.57□□□□□ -2
MCF2-204ENST00000414978 C8AP07357 584 aa2.57□□□□□ -2
MCF2-204ENST00000414978 OR52Z1P0C646 297 aa2.57□□□□□ -2
MCF2-204ENST00000414978 OPN1MW2P0DN77 364 aa2.57□□□□□ -2
MCF2-204ENST00000414978 OPN1MW3P0DN78 364 aa2.57□□□□□ -2
MCF2-204ENST00000414978 LAG3P18627 525 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CYP11B2P19099 503 aa2.57□□□□□ -2
MCF2-204ENST00000414978 GCSHP23434 173 aa2.57□□□□□ -2
MCF2-204ENST00000414978 RPA1P27694 616 aa2.57□□□□□ -2
MCF2-204ENST00000414978 GKP32189 559 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SERPINB6P35237 376 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CPOXP36551 454 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SMSP52788 366 aa2.57□□□□□ -2
MCF2-204ENST00000414978 DGKQP52824 942 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PSG6Q00889 435 aa2.57□□□□□ -2
MCF2-204ENST00000414978 DRAP1Q14919 205 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 ODF2Q5BJF6 829 aa2.57□□□□□ -2
MCF2-204ENST00000414978 TCP11X2Q5H9J9 407 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SPDYAQ5MJ70 313 aa2.57□□□□□ -2
MCF2-204ENST00000414978 FAM171A1Q5VUB5 890 aa2.57□□□□□ -2
MCF2-204ENST00000414978 KDELC1Q6UW63 502 aa2.57□□□□□ -2
MCF2-204ENST00000414978 ATG14Q6ZNE5 492 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CFAP77Q6ZQR2 320 aa2.57□□□□□ -2
MCF2-204ENST00000414978 LINC00696Q6ZRV3 163 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SPATA2LQ8IUW3 424 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 ZNF366Q8N895 744 aa2.57□□□□□ -2
MCF2-204ENST00000414978 OR52N2Q8NGI0 321 aa2.57□□□□□ -2
MCF2-204ENST00000414978 GSDMBQ8TAX9 411 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CHURC1Q8WUH1 139 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PRCCQ92733 491 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 FRAT1Q92837 279 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 ST6GALNAC6Q969X2 333 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PGBD1Q96JS3 809 aa2.57□□□□□ -2
MCF2-204ENST00000414978 ZNF347Q96SE7 839 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SYNPO2LQ9H987 977 aa2.57□□□□□ -2
MCF2-204ENST00000414978 ZNF304Q9HCX3 659 aa2.57□□□□□ -2
MCF2-204ENST00000414978 HPF1Q9NWY4 346 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SLC9A2Q9UBY0 812 aa2.57□□□□□ -2
MCF2-204ENST00000414978 MTCH2Q9Y6C9 303 aa2.57□□□□□ -2
MCF2-204ENST00000414978 MROH7Q68CQ1 1323 aa2.57□□□□□ -2
MCF2-204ENST00000414978 MYH1P12882 1939 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PKD1L2Q7Z442 2459 aa2.57□□□□□ -2
MCF2-204ENST00000414978 A0A0A6YYC8 382 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 MROH6A6NGR9 719 aa2.57□□□□□ -2
MCF2-204ENST00000414978 I3L1I5 382 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 SLC30A4O14863 429 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SEC14L5O43304 696 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PAGE4O60829 102 aa2.57□□□□□ -2
MCF2-204ENST00000414978 RECQL5O94762 991 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 SRPRAP08240 638 aaKnown RBP2.57□□□□□ -2
MCF2-204ENST00000414978 STMN1P16949 149 aa2.57□□□□□ -2
MCF2-204ENST00000414978 KRT4P19013 534 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PTAFRP25105 342 aa2.57□□□□□ -2
MCF2-204ENST00000414978 DHPSP49366 369 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 COG7P83436 770 aa2.57□□□□□ -2
MCF2-204ENST00000414978 MORF4L2Q15014 288 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PGM5Q15124 567 aa2.57□□□□□ -2
MCF2-204ENST00000414978 LBHQ53QV2 105 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 METTL24Q5JXM2 366 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SHEQ5VZ18 495 aa2.57□□□□□ -2
MCF2-204ENST00000414978 MCTP1Q6DN14 999 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SLC25A24Q6NUK1 477 aa2.57□□□□□ -2
MCF2-204ENST00000414978 TCTN3Q6NUS6 607 aa2.57□□□□□ -2
MCF2-204ENST00000414978 ACSM6Q6P461 480 aa2.57□□□□□ -2
MCF2-204ENST00000414978 IL20RBQ6UXL0 311 aa2.57□□□□□ -2
MCF2-204ENST00000414978 TECPR1Q7Z6L1 1165 aa2.57□□□□□ -2
MCF2-204ENST00000414978 TBC1D26Q86UD7 250 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CROCCP3Q8IVE0 287 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SLC35F3Q8IY50 421 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CARFQ8N187 725 aa2.57□□□□□ -2
MCF2-204ENST00000414978 LINC01356Q8N9X3 169 aa2.57□□□□□ -2
MCF2-204ENST00000414978 TRIB2Q92519 343 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SLC25A28Q96A46 364 aa2.57□□□□□ -2
MCF2-204ENST00000414978 BSCL2Q96G97 398 aaPredicted RBP2.57□□□□□ -2
MCF2-204ENST00000414978 C1QTNF5Q9BXJ0 243 aa2.57□□□□□ -2
MCF2-204ENST00000414978 TEX12Q9BXU0 123 aa2.57□□□□□ -2
MCF2-204ENST00000414978 WDR11Q9BZH6 1224 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CIPCQ9C0C6 399 aa2.57□□□□□ -2
MCF2-204ENST00000414978 AMBRA1Q9C0C7 1298 aa2.57□□□□□ -2
MCF2-204ENST00000414978 ZNF350Q9GZX5 532 aa2.57□□□□□ -2
MCF2-204ENST00000414978 NUAK2Q9H093 628 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PPIL3Q9H2H8 161 aaKnown RBP2.57□□□□□ -2
MCF2-204ENST00000414978 PCDH18Q9HCL0 1135 aa2.57□□□□□ -2
MCF2-204ENST00000414978 SEC63Q9UGP8 760 aaKnown RBP2.57□□□□□ -2
MCF2-204ENST00000414978 TLK1Q9UKI8 766 aa2.57□□□□□ -2
MCF2-204ENST00000414978 TBX21Q9UL17 535 aa2.57□□□□□ -2
MCF2-204ENST00000414978 PLAGL1Q9UM63 463 aa2.57□□□□□ -2
MCF2-204ENST00000414978 LSM4Q9Y4Z0 139 aaKnown RBP2.57□□□□□ -2
MCF2-204ENST00000414978 EDDM13A0A1B0GTR0 161 aa2.57□□□□□ -2
MCF2-204ENST00000414978 C2orf81A6NN90 581 aa2.57□□□□□ -2
MCF2-204ENST00000414978 AP3B1O00203 1094 aa2.57□□□□□ -2
MCF2-204ENST00000414978 ATP2A1O14983 1001 aa2.57□□□□□ -2
MCF2-204ENST00000414978 WIPF1O43516 503 aa2.57□□□□□ -2
MCF2-204ENST00000414978 RSL1D1O76021 490 aaKnown RBP2.57□□□□□ -2
MCF2-204ENST00000414978 RGS11O94810 467 aa2.57□□□□□ -2
MCF2-204ENST00000414978 MMP2P08253 660 aa2.57□□□□□ -2
MCF2-204ENST00000414978 CYBAP13498 195 aa2.57□□□□□ -2
MCF2-204ENST00000414978 EEF1DP29692 281 aaKnown RBP2.57□□□□□ -2
MCF2-204ENST00000414978 HOXA7P31268 230 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms