RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 CAB39LQ9H9S4 337 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 GPR27Q9NS67 375 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 MKS1Q9NXB0 559 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 DHRS7Q9Y394 339 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 DNMT3AQ9Y6K1 912 aaPredicted RBP14.06□□□□□ -0.16
SF3B1-204ENST00000414963 A0A087X1B8 175 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 A0A096LPK6 155 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 A6NNZ2 444 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 TNFRSF10CO14798 259 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 KPNA5O15131 536 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 NUAK1O60285 661 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 MAGEC1O60732 1142 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 GPR37L1O60883 481 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 LILRB5O75023 590 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 NIPSNAP2O75323 286 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 RHOBTB1O94844 696 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 FTH1P02794 183 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 C2P06681 752 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 CEACAM5P06731 702 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 SLC35E2BP0CK96 405 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 PYGBP11216 843 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 COL6A2P12110 1019 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 ZNF8P17098 575 aaPredicted RBP14.05□□□□□ -0.16
SF3B1-204ENST00000414963 KELP23276 732 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 CTSCP53634 463 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 MAGOHP61326 146 aaKnown RBP14.05□□□□□ -0.16
SF3B1-204ENST00000414963 GTF2H3Q13889 308 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 PDE1CQ14123 709 aaPredicted RBP14.05□□□□□ -0.16
SF3B1-204ENST00000414963 NFATC4Q14934 902 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 KDM7AQ6ZMT4 941 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 LPCAT2Q7L5N7 544 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 CMC1Q7Z7K0 106 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 IQCHQ86VS3 1027 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 DCP2Q8IU60 420 aaKnown RBP14.05□□□□□ -0.16
SF3B1-204ENST00000414963 SRRM1Q8IYB3 904 aaKnown RBP14.05□□□□□ -0.16
SF3B1-204ENST00000414963 BANPQ8N9N5 519 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 INPP5DQ92835 1189 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 UBXN10Q96LJ8 280 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 TSSK1BQ9BXA7 367 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 C11orf16Q9NQ32 467 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 SPATS2LQ9NUQ6 558 aaKnown RBP14.05□□□□□ -0.16
SF3B1-204ENST00000414963 ZSCAN32Q9NX65 697 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 TLK1Q9UKI8 766 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 ANKRD6Q9Y2G4 727 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 TMEM98Q9Y2Y6 226 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 ACOT9Q9Y305 439 aa14.05□□□□□ -0.16
SF3B1-204ENST00000414963 KLHL33A6NCF5 533 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 IQCF5A8MTL0 148 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 E5RI56 91 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 H3BQF6 201 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 HRO43593 1189 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 DNAJC6O75061 913 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 CHRM3P20309 590 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 SAT1P21673 171 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 AOAHP28039 575 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 SLC18A1P54219 525 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 RACK1P63244 317 aaKnown RBP14.04□□□□□ -0.16
SF3B1-204ENST00000414963 OVGP1Q12889 678 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 INSCQ1MX18 579 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 ZNF658BQ4V348 819 aaPredicted RBP14.04□□□□□ -0.16
SF3B1-204ENST00000414963 PPM1JQ5JR12 505 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 WDR45BQ5MNZ6 344 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 KCTD16Q68DU8 428 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 TMEM220Q6QAJ8 160 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 Q6ZSR6 202 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 DET1Q7L5Y6 550 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 CLEC14AQ86T13 490 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 ZNF547Q8IVP9 402 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 MFSD2AQ8NA29 543 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 ZBTB44Q8NCP5 570 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 CD200R1Q8TD46 325 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 PDLIM5Q96HC4 596 aaKnown RBP14.04□□□□□ -0.16
SF3B1-204ENST00000414963 ZC3H10Q96K80 434 aaKnown RBP14.04□□□□□ -0.16
SF3B1-204ENST00000414963 HSPA12BQ96MM6 686 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 SMC6Q96SB8 1091 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 GPR21Q99679 349 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 MYOCQ99972 504 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 CCM2Q9BSQ5 444 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 SYTL2Q9HCH5 934 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 GALPQ9UBC7 116 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 DCDC2Q9UHG0 476 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 CA5BQ9Y2D0 317 aa14.04□□□□□ -0.16
SF3B1-204ENST00000414963 MUC3AQ02505 3323 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 C17orf113A0A1B0GUU1 675 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 A0A1W2PR77 199 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 TMEM202A6NGA9 273 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PRR33A8MZF0 331 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 H0Y8X5 98 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 EIF3FO00303 357 aaPredicted RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PRPF4O43172 522 aaKnown RBP eCLIP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PHGDHO43175 533 aaKnown RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 TYROBPO43914 113 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 TRIM16O95361 564 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 ASMTLO95671 621 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 FUCA1P04066 466 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 GSTA1P08263 222 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 SP9P0CG40 484 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 BRAFP15056 766 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 CREB1P16220 341 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms