RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 PYGBP11216 843 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 FMO4P31512 558 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 RPS9P46781 194 aaKnown RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 DYNC1I2Q13409 638 aaKnown RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 TMEM259Q4ZIN3 620 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 ZNF648Q5T619 568 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 LGSNQ5TDP6 509 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 ZDHHC20Q5W0Z9 365 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 ARHGAP22Q7Z5H3 698 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 SPEM1Q8N4L4 309 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 FAM13CQ8NE31 585 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 B4GALNT2Q8NHY0 566 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 GABPB2Q8TAK5 448 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 EDAQ92838 391 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 DTNBP1Q96EV8 351 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 UHRF1Q96T88 793 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 INTS10Q9NVR2 710 aaKnown RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 CYP8B1Q9UNU6 501 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 PRSS21Q9Y6M0 314 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 KNL1Q8NG31 2342 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 ABCA7Q8IZY2 2146 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 RGSL1A5PLK6 1076 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 INPP4BO15327 924 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 RNGTTO60942 597 aaKnown RBP15.35■□□□□ 0.05
SHMT2-202ENST00000414700 SPAG7O75391 227 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 MT-ND3P03897 115 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 CNTFP26441 200 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 CDKN2DP55273 166 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 TAS2R39P59534 338 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 B4GALNT1Q00973 533 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 TIAL1Q01085 375 aaKnown RBP eCLIP15.35■□□□□ 0.057e-9■■□□□ 13.1
SHMT2-202ENST00000414700 ITGA9Q13797 1035 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 SETDB1Q15047 1291 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 WSCD2Q2TBF2 565 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 ZNF284Q2VY69 593 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 GPR33Q49SQ1 333 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 SETMARQ53H47 684 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-202ENST00000414700 CTSL3PQ5NE16 218 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 GPRC6AQ5T6X5 926 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 NRSN1Q8IZ57 195 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 TRAM1L1Q8N609 369 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 ANKRD42Q8N9B4 389 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 ELMO2Q96JJ3 720 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 TCF12Q99081 682 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 ZSCAN5AQ9BUG6 496 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 FZD3Q9NPG1 666 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 MBNL1Q9NR56 388 aaKnown RBP15.35■□□□□ 0.05
SHMT2-202ENST00000414700 SNX15Q9NRS6 342 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 DLGAP2Q9P1A6 1054 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 MED16Q9Y2X0 877 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 WDR87Q6ZQQ6 2873 aa15.35■□□□□ 0.05
SHMT2-202ENST00000414700 IQCF5A8MTL0 148 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 PHGDHO43175 533 aaKnown RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 DNAJC6O75061 913 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 PTDSS1P48651 473 aaKnown RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 RPS21P63220 83 aaKnown RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 USP10Q14694 798 aaKnown RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 AARS2Q5JTZ9 985 aaKnown RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 HECTD2Q5U5R9 776 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 RAET1GQ6H3X3 334 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 OR52E8Q6IFG1 317 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 CERS6Q6ZMG9 384 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 TRIM74Q86UV6 250 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 PIM3Q86V86 326 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 MTBPQ96DY7 904 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 BTBD1Q9H0C5 482 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 CDH19Q9H159 772 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 MYLK2Q9H1R3 596 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 P2RY12Q9H244 342 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 C12orf65Q9H3J6 166 aaKnown RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 KCNK9Q9NPC2 374 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 PCMTD2Q9NV79 361 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 CNOT6Q9ULM6 557 aaKnown RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 RAD51BO15315 384 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 BRAFP15056 766 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 TYK2P29597 1187 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 CLCN5P51795 746 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 DPTQ07507 201 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 PDE1CQ14123 709 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 MPP2Q14168 576 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 MUM1Q2TAK8 710 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 HORMAD1Q86X24 394 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 GDAP1Q8TB36 358 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 LENG8Q96PV6 779 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-202ENST00000414700 MYOCQ99972 504 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 C1QTNF2Q9BXJ5 285 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 SLC17A9Q9BYT1 436 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 PREBQ9HCU5 417 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 SMOXQ9NWM0 555 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 GALPQ9UBC7 116 aa15.34■□□□□ 0.05
SHMT2-202ENST00000414700 PDLIM1O00151 329 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 SLC31A1O15431 190 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 DCXO43602 365 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 NIPSNAP2O75323 286 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 PCCBP05166 539 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 PTGER3P43115 390 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 MAGEA12P43365 314 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 GPR1P46091 355 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 516.9 ms