RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 JMJD7P0C870 316 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 ATP1B2P14415 290 aaPredicted RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 TPSB2P20231 275 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 AK4P27144 223 aaPredicted RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 CD1CP29017 333 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CSTF2P33240 577 aaKnown RBP eCLIP6.29□□□□□ -1.4
USP54-202ENST00000413442 TSPAN7P41732 249 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 MAGEA6P43360 314 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 XIAPP98170 497 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 ACVR1Q04771 509 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 LLGL1Q15334 1064 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 TPSAB1Q15661 275 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CHRNA6Q15825 494 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CYP1B1Q16678 543 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 GPRC6AQ5T6X5 926 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 DOK6Q6PKX4 331 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 TMEM220Q6QAJ8 160 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 PACS1Q6VY07 963 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 RFLNAQ6ZTI6 216 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 TMEM26Q6ZUK4 368 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 GSTA5Q7RTV2 222 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 LRRC6Q86X45 466 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 KMT5CQ86Y97 462 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 SLITRK4Q8IW52 837 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 TRIM48Q8IWZ4 208 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 NXPE1Q8N323 547 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CCL4L1Q8NHW4 92 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 LRRN4Q8WUT4 740 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 SNRNP27Q8WVK2 155 aaKnown RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 CXorf40BQ96DE9 158 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 ZDHHC12Q96GR4 267 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 PDLIM2Q96JY6 352 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 TAAR9Q96RI9 348 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 NAT9Q9BTE0 207 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 EFHD1Q9BUP0 239 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 DDA1Q9BW61 102 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 ETNK1Q9HBU6 452 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 MRM3Q9HC36 420 aaKnown RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 SYTL2Q9HCH5 934 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 SLC40A1Q9NP59 571 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CASS4Q9NQ75 786 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 FBXO8Q9NRD0 319 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 RAB6BQ9NRW1 208 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 KCND1Q9NSA2 647 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 ZDHHC3Q9NYG2 299 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 SIRPGQ9P1W8 387 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CPNE7Q9UBL6 633 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 TRIM10Q9UDY6 481 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 TBC1D29Q9UFV1 150 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CRLS1Q9UJA2 301 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 PACSIN2Q9UNF0 486 aaPredicted RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 VPS9D1Q9Y2B5 631 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 PCDHB11Q9Y5F2 797 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 DNAH14Q0VDD8 3507 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 TEX51A0A1B0GUA7 166 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 FAM149AA5PLN7 773 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 H3BMM5 538 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 PGRMC1O00264 195 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 TAF4O00268 1085 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 BRINP1O60477 761 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 RECKO95980 971 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 IFNB1P01574 187 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 C9P02748 559 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 FTH1P02794 183 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 TUBB4AP04350 444 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 APRTP07741 180 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 OR56A5P0C7T3 313 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 PIRTP0C851 137 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 ACP5P13686 325 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 AMD1P17707 334 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 PAMP19021 973 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 ACRV1P26436 265 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 AKT1P31749 480 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 RPL22P35268 128 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 UGT1A5P35504 534 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 CHRNA4P43681 627 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 MAPK9P45984 424 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 FNTAP49354 379 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 TTPAP49638 278 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 PRLHRP49683 370 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 ZNF140P52738 457 aaPredicted RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 ADARP55265 1226 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 UBE2IP63279 158 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 GABREP78334 506 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 IL11RAQ14626 422 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 PTPRRQ15256 657 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 MAP9Q49MG5 647 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 TSTD2Q5T7W7 516 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 ALS2CLQ60I27 953 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 CAPRIN2Q6IMN6 1127 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 AADACL2Q6P093 401 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 LRRC8BQ6P9F7 803 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 PPP1R21Q6ZMI0 780 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 SYDE1Q6ZW31 735 aaPredicted RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 B4GALNT4Q76KP1 1039 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 MARK2Q7KZI7 788 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 ARHGAP22Q7Z5H3 698 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 C11orf96Q7Z7L8 435 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 SDCCAG8Q86SQ7 713 aaPredicted RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 TRAPPC5Q8IUR0 188 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms