RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SERPINB5P36952 375 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 GRIA2P42262 883 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 TNFRSF4P43489 277 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 SCNN1BP51168 640 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 AP1S1P61966 158 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 CDH18Q13634 790 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 FAM83EQ2M2I3 478 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 HECTD2Q5U5R9 776 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 NCEH1Q6PIU2 408 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 METTL3Q86U44 580 aaKnown RBP16.97■□□□□ 0.31
PTPRC-206ENST00000413409 FSTL5Q8N475 847 aaPredicted RBP16.97■□□□□ 0.31
PTPRC-206ENST00000413409 SLC7A6OSQ96CW6 309 aaPredicted RBP16.97■□□□□ 0.31
PTPRC-206ENST00000413409 ALG14Q96F25 216 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 OLFM1Q99784 485 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 FEM1AQ9BSK4 669 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 GATA5Q9BWX5 397 aaPredicted RBP16.97■□□□□ 0.31
PTPRC-206ENST00000413409 ADGRE3Q9BY15 652 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 ZDHHC5Q9C0B5 715 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 NMUR2Q9GZQ4 415 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 DRC3Q9H069 523 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 CLMPQ9H6B4 373 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 IGSF5Q9NSI5 407 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 CATSPERZQ9NTU4 200 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 HACD3Q9P035 362 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 MARCOQ9UEW3 520 aaPredicted RBP16.97■□□□□ 0.31
PTPRC-206ENST00000413409 VPS51Q9UID3 782 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 VPS28Q9UK41 221 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 BTBD3Q9Y2F9 522 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 FNDC3AQ9Y2H6 1198 aaKnown RBP16.97■□□□□ 0.31
PTPRC-206ENST00000413409 SH3BP1Q9Y3L3 701 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 ARL5AQ9Y689 179 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 CABIN1Q9Y6J0 2220 aa16.97■□□□□ 0.31
PTPRC-206ENST00000413409 CCDC162PA2VCL2 907 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 CD3EAPO15446 510 aaKnown RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 SNAP91O60641 907 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 CBX6O95503 412 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 GOT2P00505 430 aaKnown RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 PRLP01236 227 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 SERPINA6P08185 405 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 LTA4HP09960 611 aaKnown RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 FDXRP22570 491 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 MZF1P28698 734 aaPredicted RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 PTPN4P29074 926 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 ARRB2P32121 409 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 CSKP41240 450 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 WASP42768 502 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 SUOXP51687 545 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 DNAJB13P59910 316 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 DLG1Q12959 904 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 RCN2Q14257 317 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 MPPE1Q53F39 396 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 TECRLQ5HYJ1 363 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 AGAP9Q5VTM2 703 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 GLT6D1Q7Z4J2 308 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 PTAR1Q7Z6K3 402 aaPredicted RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 PARP9Q8IXQ6 854 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 KIF2BQ8N4N8 673 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 OR4L1Q8NH43 312 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 PDCD6IPQ8WUM4 868 aaKnown RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 CCDC126Q96EE4 140 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 NSL1Q96IY1 281 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 TBATAQ96M53 351 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 NSMCE3Q96MG7 304 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 C2orf49Q9BVC5 232 aaPredicted RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 CDH19Q9H159 772 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 TM7SF3Q9NS93 570 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 MARCH4Q9P2E8 410 aaPredicted RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 SUSD2Q9UGT4 822 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 RPL26L1Q9UNX3 145 aaKnown RBP16.96■□□□□ 0.31
PTPRC-206ENST00000413409 KCTD3Q9Y597 815 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 SPO11Q9Y5K1 396 aa16.96■□□□□ 0.31
PTPRC-206ENST00000413409 CAPN14A8MX76 684 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 PLK4O00444 970 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 NPHS1O60500 1241 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 KRT16P08779 473 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 KITP10721 976 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 NDUFV2P19404 249 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 HNRNPH1P31943 449 aaKnown RBP16.96■□□□□ 0.3
PTPRC-206ENST00000413409 EIF2DP41214 584 aaKnown RBP16.96■□□□□ 0.3
PTPRC-206ENST00000413409 STC1P52823 247 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 TRAF2Q12933 501 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 TUBB3Q13509 450 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 ZNF460Q14592 562 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 ZNF789Q5FWF6 425 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 FSCBQ5H9T9 825 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 RETSATQ6NUM9 610 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 KLC3Q6P597 504 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 NAPRTQ6XQN6 538 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 SDCCAG8Q86SQ7 713 aaPredicted RBP16.96■□□□□ 0.3
PTPRC-206ENST00000413409 MFN1Q8IWA4 741 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 LPCAT1Q8NF37 534 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 OR13C4Q8NGS5 318 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 RHBDD1Q8TEB9 315 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 HEXDCQ8WVB3 486 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 NXNL1Q96CM4 212 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 EXOC2Q96KP1 924 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 TCF12Q99081 682 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 SLC6A17Q9H1V8 727 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 GAREM1Q9H706 876 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms