RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ITIH1P19827 911 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 GRIK1P39086 918 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 C6orf136Q5SQH8 315 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 ANKRD13BQ86YJ7 626 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 TMCO5AQ8N6Q1 288 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 ZNF555Q8NEP9 628 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 OR2T11Q8NH01 316 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 BRSK1Q8TDC3 778 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 ABHD8Q96I13 439 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 FUNDC2Q9BWH2 189 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 ZYG11BQ9C0D3 744 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 MIOSQ9NXC5 875 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 DNAJB9Q9UBS3 223 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 NAALAD2Q9Y3Q0 740 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 CPQQ9Y646 472 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 PATJQ8NI35 1801 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 G3V2T6 193 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 BCAS1O75363 584 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 GMNNO75496 209 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 OPRL1P41146 370 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 MTHFRP42898 656 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 YWHAHQ04917 246 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 TRIM32Q13049 653 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 TSNQ15631 228 aaKnown RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 CYP2A13Q16696 494 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 UPP1Q16831 310 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SLC2A7Q6PXP3 512 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 PAQR3Q6TCH7 311 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 CRTC3Q6UUV7 619 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SLC16A12Q6ZSM3 486 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 NKAPQ8N5F7 415 aaKnown RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 S100ZQ8WXG8 99 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 FUBP1Q96AE4 644 aaKnown RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 VMP1Q96GC9 406 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 ZNF641Q96N77 438 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 CGREF1Q99674 301 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 HGH1Q9BTY7 390 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 OSBPL10Q9BXB5 764 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 ARMC7Q9H6L4 198 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 GORASP2Q9H8Y8 452 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 FAM105AQ9NUU6 356 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 ZNF225Q9UK10 706 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 PCDHGA8Q9Y5G5 932 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 ARL5AQ9Y689 179 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 MRPL42Q9Y6G3 142 aaKnown RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 ANKRD36A6QL64 1941 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 TRIM43BA6NCK2 446 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 TNFRSF10BO14763 440 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 KCNH1O95259 989 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 HTR1AP08908 422 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 IL7RP16871 459 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 CES1P23141 567 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SOX11P35716 441 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 IL10RBQ08334 325 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SPCS2Q15005 226 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SETMARQ53H47 684 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 GPRIN3Q6ZVF9 776 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 RALGPS2Q86X27 583 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 PGBD5Q8N414 524 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 OR8J3Q8NGG0 315 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 BLOC1S5Q8TDH9 187 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SLC35B4Q969S0 331 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SLC39A13Q96H72 371 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 ALPK1Q96QP1 1244 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 MBOAT4Q96T53 435 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SMPD4Q9NXE4 827 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 WARS2Q9UGM6 360 aaKnown RBP17.44■□□□□ 0.38
SDCBP-202ENST00000413219 TLR6Q9Y2C9 796 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 SNX5Q9Y5X3 404 aa17.44■□□□□ 0.38
SDCBP-202ENST00000413219 CNTN5O94779 1100 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PRDX3P30048 256 aaKnown RBP17.43■□□□□ 0.38
SDCBP-202ENST00000413219 IDUAP35475 653 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PBX3P40426 434 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 AQP6Q13520 282 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PWP1Q13610 501 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 POLD3Q15054 466 aaPredicted RBP17.43■□□□□ 0.38
SDCBP-202ENST00000413219 ATP6AP1LQ52LC2 224 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 SULT1C3Q6IMI6 304 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 FNDC5Q8NAU1 212 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PIK3C3Q8NEB9 887 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PSMG2Q969U7 264 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 TAMM41Q96BW9 452 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 CCDC138Q96M89 665 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 ZNF382Q96SR6 550 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PSD2Q9BQI7 771 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PIF1Q9H611 641 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 AKIP1Q9NQ31 210 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 DAPK2Q9UIK4 370 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 IKZF3Q9UKT9 509 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 BAG5Q9UL15 447 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 MED16Q9Y2X0 877 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 GIT1Q9Y2X7 761 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 KRBA1A5PL33 1030 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 CASTOR2A6NHX0 329 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 MGEA5O60502 916 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 UGT2B11O75310 529 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 ALOX5P09917 674 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 PGFP49763 221 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 AFF1P51825 1210 aaKnown RBP17.43■□□□□ 0.38
SDCBP-202ENST00000413219 TPD52P55327 224 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms