RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SURF1Q15526 300 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 HIF1AQ16665 826 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SYT16Q17RD7 645 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 OTUD3Q5T2D3 398 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PRAMEF9Q5VWM5 478 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 FSTL4Q6MZW2 842 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CCDC62Q6P9F0 684 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PCSK4Q6UW60 755 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 KYAT3Q6YP21 454 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 LRRC69Q6ZNQ3 347 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 LPCAT2Q7L5N7 544 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TMCO2Q7Z6W1 182 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ZNF554Q86TJ5 538 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 IFNEQ86WN2 208 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TMC8Q8IU68 726 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CTAGE3PQ8IX95 158 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CYP4Z2PQ8N1L4 340 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 FAM181AQ8N9Y4 354 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ICA1LQ8NDH6 482 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 HPS1Q92902 700 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 RADILQ96JH8 1075 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 KLHL15Q96M94 604 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ZNF641Q96N77 438 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CDADC1Q9BWV3 514 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 IL1RL2Q9HB29 575 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 MKS1Q9NXB0 559 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ARHGAP26Q9UNA1 814 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 POLIQ9UNA4 740 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SNX6Q9UNH7 406 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 APOBEC2Q9Y235 224 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PCDHGB2Q9Y5G2 931 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 GPC6Q9Y625 555 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 NOP56O00567 594 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PODXLO00592 558 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TRIM24O15164 1050 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 YY2O15391 372 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CREB3O43889 395 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 NDUFS6O75380 124 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 GCATO75600 419 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PRAMEF12O95522 483 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 UBL4AP11441 157 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CALML3P27482 149 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PSMC2P35998 433 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SLC18A1P54219 525 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 RPS3AP61247 264 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 VBP1P61758 197 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 COG7P83436 770 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ARHGAP1Q07960 439 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CTBP1Q13363 440 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 GSTA3Q16772 222 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SOWAHAQ2M3V2 549 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ARL13BQ3SXY8 428 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 MARCH8Q5T0T0 291 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CERCAMQ5T4B2 595 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ARHGEF18Q6ZSZ5 1173 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 USP51Q70EK9 711 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PCGF5Q86SE9 256 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 NR2C2APQ86WQ0 139 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 MSRB3Q8IXL7 192 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 NLGN4YQ8NFZ3 816 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TSPAN14Q8NG11 270 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ZNF707Q96C28 371 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 RHBDF1Q96CC6 855 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 LRIG1Q96JA1 1093 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 BARHL1Q9BZE3 327 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 C8orf33Q9H7E9 229 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ENTPD7Q9NQZ7 604 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 DTLQ9NZJ0 730 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 LARSQ9P2J5 1176 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TMEFF2Q9UIK5 374 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PSMD13Q9UNM6 376 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PCDHB3Q9Y5E6 796 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TRAV19A0A0A6YYK7 116 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ANTXRLA6NF34 631 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 FAM170BA6NMN3 283 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 IPO5O00410 1097 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ZBTB5O15062 677 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TBX3O15119 743 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 GDF9O60383 454 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ICMTO60725 284 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 FAM13AO94988 1023 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 ZNF883P0CG24 379 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TFPIP10646 304 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 EIF2AK2P19525 551 aaKnown RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 TNFAIP3P21580 790 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SREBF1P36956 1147 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CXCL12P48061 93 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 PRKAA2P54646 552 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SESN2P58004 480 aaPredicted RBP3.09□□□□□ -1.91
RGPD3-202ENST00000409886 BAK1Q16611 211 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SIGIRRQ6IA17 410 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 SCARA5Q6ZMJ2 495 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CEP68Q76N32 757 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 STRADAQ7RTN6 431 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 CLEC14AQ86T13 490 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 GRAMD2AQ8IUY3 354 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 LRRC43Q8N309 656 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 RNF175Q8N4F7 328 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 UBR7Q8N806 425 aa3.09□□□□□ -1.91
RGPD3-202ENST00000409886 LMNTD1Q8N9Z9 388 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms