RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CST8O60676 142 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 CPNE6O95741 557 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 APOC2P02655 101 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 ZSCAN5DPP0CG00 497 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 CR2P20023 1033 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 GPD1P21695 349 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 MPSTP25325 297 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 AK4P27144 223 aaPredicted RBP12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 EPHB2P29323 1055 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 MIPP30301 263 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 UGT1A3P35503 534 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 OTUD4Q01804 1114 aaKnown RBP12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 CCDC38Q502W7 563 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 LACTB2Q53H82 288 aaPredicted RBP12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 RNF187Q5TA31 235 aaPredicted RBP12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 ERAP2Q6P179 960 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 CENPUQ71F23 418 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 ZNF438Q7Z4V0 828 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 LRRC34Q8IZ02 419 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 ACTL9Q8TC94 416 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 NTAN1Q96AB6 310 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 C9orf72Q96LT7 481 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 B3GNT4Q9C0J1 378 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 ZNF71Q9NQZ8 489 aaPredicted RBP12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 OCIAD1Q9NX40 245 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 UBA2Q9UBT2 640 aaPredicted RBP12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 SEPT3Q9UH03 358 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 PRSS38A1L453 326 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 WASH4PA8MWX3 477 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 CACNB4O00305 520 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 TNFRSF10CO14798 259 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 NKX2-8O15522 239 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 DUX1O43812 170 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 CREB3O43889 395 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 GP1BBP13224 206 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 ETS1P14921 441 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 YBEYP58557 167 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 ACTN3Q08043 901 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 TMEM164Q5U3C3 297 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 HIST2H2BCQ6DN03 193 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 VSIG1Q86XK7 387 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 PPIL6Q8IXY8 311 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 KCTD6Q8NC69 237 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 GPBAR1Q8TDU6 330 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 ZDHHC1Q8WTX9 485 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 CKAP2Q8WWK9 683 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 HAUS1Q96CS2 278 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 TMEM121Q9BTD3 319 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 CTNNAL1Q9UBT7 734 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 FETUBQ9UGM5 382 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 MAN2B2Q9Y2E5 1009 aa12.61□□□□□ -0.39
CHRNA1-205ENST00000409542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 PPM1DO15297 605 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 HOXC4P09017 264 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CCNB1P14635 433 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 BRAFP15056 766 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CSF2RBP32927 897 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 LIMK2P53671 638 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 SLC18A1P54219 525 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CBLBQ13191 982 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 TFDP2Q14188 446 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 NR1D2Q14995 579 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 SMTNL2Q2TAL5 461 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 PNCKQ6P2M8 343 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 BRAT1Q6PJG6 821 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 PPP1R21Q6ZMI0 780 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 RFX6Q8HWS3 928 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CYP4X1Q8N118 509 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CNPY4Q8N129 248 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 NAGSQ8N159 534 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 UMODL1-AS1Q8N2C9 162 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 IL22RA1Q8N6P7 574 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 TEKT4Q8WW24 435 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 MAML1Q92585 1016 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CELF6Q96J87 481 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 ZNF641Q96N77 438 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CDH19Q9H159 772 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 CARS2Q9HA77 564 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 SENP1Q9P0U3 644 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 TAAR2Q9P1P5 351 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 FZD10Q9ULW2 581 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 PLEKHM1Q9Y4G2 1056 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 PCDHGA3Q9Y5H0 932 aa12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 USP9YO00507 2555 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-205ENST00000409542 EXOC1LA0A1B0GW35 172 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CFAP69A5D8W1 941 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 RHPN2P1A8MT19 583 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ZNF487B1APH4 448 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 E7ESA3 106 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 HGSO14964 777 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 RAD1O60671 282 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PRAMEF11O60813 436 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CEACAM5P06731 702 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms