RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MPP5Q8N3R9 675 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 ARL14Q8N4G2 192 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 ZNF592Q92610 1267 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 MFSD3Q96ES6 412 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 CCDC97Q96F63 343 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 OSGEPL1Q9H4B0 414 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 DNAJC16Q9Y2G8 782 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 RP1P56715 2156 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 PLXNB3Q9ULL4 1909 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 KLHL33A6NCF5 533 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 SMAPO00193 183 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 SGTAO43765 313 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 OPA1O60313 960 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 EML2O95834 649 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 TOP3BO95985 862 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 F3P13726 295 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 MAZP56270 477 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 CKAP4Q07065 602 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 MORF4L2Q15014 288 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 LYPLAL1Q5VWZ2 237 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 IYDQ6PHW0 289 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 CERS6Q6ZMG9 384 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 TMPRSS7Q7RTY8 843 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 TMPRSS12Q86WS5 348 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 SFRP1Q8N474 314 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 MAPK15Q8TD08 544 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 PATE1Q8WXA2 126 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 TTC1Q99614 292 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 ABCG4Q9H172 646 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 LRIT1Q9P2V4 623 aa19.53■□□□□ 0.72
PDLIM2-207ENST00000409417 FAM237BA0A1B0GVD1 139 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 FAM187AA6NFU0 413 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 SNX2O60749 519 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 SEC31AO94979 1220 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 SLC2A4P14672 509 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 PNLIPP16233 465 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 NSG1P42857 185 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 PRLHRP49683 370 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 C2orf54Q08AI8 447 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 DMPKQ09013 629 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 ITIH4Q14624 930 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 WHAMMP3Q1A5X7 153 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 FASTKD1Q53R41 847 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 AARS2Q5JTZ9 985 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 CES3Q6UWW8 571 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 WASH2PQ6VEQ5 465 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 GALNT15Q8N3T1 639 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 BEND7Q8N7W2 519 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 NAT14Q8WUY8 206 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 CCDC74AQ96AQ1 378 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 SNF8Q96H20 258 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 LINC00615Q96LM1 132 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 CCDC3Q9BQI4 270 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 SCNM1Q9BWG6 230 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 WASH6PQ9NQA3 447 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 PRDM8Q9NQV8 689 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 ANGPTL2Q9UKU9 493 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 RNF215Q9Y6U7 377 aa19.52■□□□□ 0.72
PDLIM2-207ENST00000409417 MGAT4DA6NG13 374 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 OR5K4A6NMS3 321 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 EFCAB8A8MWE9 144 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 AP2A2O94973 939 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 VAPBO95292 243 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 IDSP22304 550 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 ARNTP27540 789 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 PPARGP37231 505 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 INSM1Q01101 510 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 TUBB2AQ13885 445 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 AGAP9Q5VTM2 703 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 PACS1Q6VY07 963 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 SIGLEC10Q96LC7 697 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 TUBB2BQ9BVA1 445 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 TRIM31Q9BZY9 425 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 CATSPERZQ9NTU4 200 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 RABGEF1Q9UJ41 708 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 ANAPC5Q9UJX4 755 aa19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 ZFC3H1O60293 1989 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-207ENST00000409417 CHD8Q9HCK8 2581 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 KIR2DS5A0A0G2JLQ3 304 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 A0A0G2JNG1 304 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 FAM221BA6H8Z2 402 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 KIR2DS3K7RE56 304 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 CD3EAPO15446 510 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 PAMP19021 973 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 FASLGP48023 281 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 MRPS25P82663 173 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 KIR2DS5Q14953 304 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 ANKRD20A4Q4UJ75 823 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 DNAJC21Q5F1R6 531 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 HES3Q5TGS1 186 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 KIAA0930Q6ICG6 404 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 HIBCHQ6NVY1 386 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 ABRAXAS1Q6UWZ7 409 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 ZNF438Q7Z4V0 828 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 TMEM135Q86UB9 458 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 AGGF1Q8N302 714 aaeCLIP19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 CLDN19Q8N6F1 224 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 OR2L2Q8NH16 312 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 WDR48Q8TAF3 677 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 SLC37A2Q8TED4 501 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms