RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FNDC3BQ53EP0 1204 aaKnown RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 HSD11B1LQ7Z5J1 315 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 SUGP1Q8IWZ8 645 aaKnown RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 ST13P5Q8NFI4 369 aaPredicted RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 MRPL38Q96DV4 380 aaKnown RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 LENG8Q96PV6 779 aaPredicted RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 FAM83DQ9H4H8 585 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 LATS2Q9NRM7 1088 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 MRGBPQ9NV56 204 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 CDH22Q9UJ99 828 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 TSR3Q9UJK0 312 aaKnown RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 PRRC2BQ5JSZ5 2229 aaKnown RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 IGLV3-16A0A075B6K0 115 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 FCARP24071 287 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 DCDC1P59894 354 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 TANGO2Q6ICL3 276 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 TMEM184AQ6ZMB5 413 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 DPPA4Q7L190 304 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 AGAP11Q8TF27 550 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 ZNF483Q8TF39 744 aaPredicted RBP18.71■□□□□ 0.59
USP39-202ENST00000409025 FAM126AQ9BYI3 521 aaPredicted RBP18.71■□□□□ 0.59
USP39-202ENST00000409025 SEMA4BQ9NPR2 832 aaPredicted RBP18.71■□□□□ 0.59
USP39-202ENST00000409025 HPS4Q9NQG7 708 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 KCTD5Q9NXV2 234 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 UTP6Q9NYH9 597 aaKnown RBP18.71■□□□□ 0.59
USP39-202ENST00000409025 CDH7Q9ULB5 785 aa18.71■□□□□ 0.59
USP39-202ENST00000409025 RGSL1A5PLK6 1076 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 RFXAPO00287 272 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 PPP6CO00743 305 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 RAD51BO15315 384 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 MLYCDO95822 493 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 PRNPP04156 253 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 OR56A5P0C7T3 313 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 CPOXP36551 454 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 AGTR2P50052 363 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 MESP2Q0VG99 397 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 UGT3A2Q3SY77 523 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 ACSBG2Q5FVE4 666 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 FBXO48Q5FWF7 155 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 KANK2Q63ZY3 851 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 ERAP2Q6P179 960 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 RP9Q8TA86 221 aaKnown RBP18.7■□□□□ 0.58
USP39-202ENST00000409025 DTX3LQ8TDB6 740 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 ABCG8Q9H221 673 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 DENND2DQ9H6A0 471 aaPredicted RBP18.7■□□□□ 0.58
USP39-202ENST00000409025 KLHL42Q9P2K6 505 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 PCTPQ9UKL6 214 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 EDDM13A0A1B0GTR0 161 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 TM7SF2O76062 418 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 RAP1GDS1P52306 607 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 B4GALNT1Q00973 533 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 CUL3Q13618 768 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 ZRSR2Q15696 482 aaKnown RBP18.7■□□□□ 0.58
USP39-202ENST00000409025 POM121L1PQ3SYA9 428 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 ANKRD54Q6NXT1 300 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 SBSNQ6UWP8 590 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 VITQ6UXI7 678 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 SCUBE1Q8IWY4 988 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 PELI3Q8N2H9 469 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 CPA6Q8N4T0 437 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 MAGEC3Q8TD91 643 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 C19orf60Q96EN9 201 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 MARK4Q96L34 752 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 RTKNQ9BST9 563 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 HGH1Q9BTY7 390 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 THTPAQ9BU02 230 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 SMOXQ9NWM0 555 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 DNAJC15Q9Y5T4 150 aa18.7■□□□□ 0.58
USP39-202ENST00000409025 COPG1Q9Y678 874 aaKnown RBP18.7■□□□□ 0.58
USP39-202ENST00000409025 CHD9Q3L8U1 2897 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 KPNA3O00505 521 aaPredicted RBP18.69■□□□□ 0.58
USP39-202ENST00000409025 GPC4O75487 556 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 CRCPO75575 148 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 CBSLP0DN79 551 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 CCND1P24385 295 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 CBSP35520 551 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 SLC25A3Q00325 362 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 RALGDSQ12967 914 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 HERC3Q15034 1050 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 HNRNPA1L2Q32P51 320 aaKnown RBP18.69■□□□□ 0.58
USP39-202ENST00000409025 SYCE2Q6PIF2 218 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 Q6ZVL8 140 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 CHSY3Q70JA7 882 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 PARS2Q7L3T8 475 aaKnown RBP18.69■□□□□ 0.58
USP39-202ENST00000409025 YAF2Q8IY57 180 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 TRAM1L1Q8N609 369 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 OR56A4Q8NGH8 313 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 OR8D1Q8WZ84 308 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 DCUN1D1Q96GG9 259 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 FAM161BQ96MY7 647 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 ZBTB26Q9HCK0 441 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 NFKBIL1Q9UBC1 381 aaPredicted RBP18.69■□□□□ 0.58
USP39-202ENST00000409025 TMPRSS11EQ9UL52 423 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 OARD1Q9Y530 152 aa18.69■□□□□ 0.58
USP39-202ENST00000409025 TNPO3Q9Y5L0 923 aaKnown RBP18.69■□□□□ 0.58
USP39-202ENST00000409025 GIPC1O14908 333 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 UBDO15205 165 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 LINC01565O15544 149 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 AKT1P31749 480 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 ETV3P41162 512 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms