RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CHRNA4P43681 627 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 ABCG1P45844 678 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 GLRBP48167 497 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 MAXP61244 160 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 STX5Q13190 355 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CUL3Q13618 768 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 TAF1AQ15573 450 aaPredicted RBP12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 COL28A1Q2UY09 1125 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 ACCSLQ4AC99 568 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 TRIM61Q5EBN2 209 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 PMS2CLQ68D20 193 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CNSTQ6PJW8 725 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 AFTPHQ6ULP2 937 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 ARMCX6Q7L4S7 300 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 MAVSQ7Z434 540 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 PTAR1Q7Z6K3 402 aaPredicted RBP12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CEP97Q8IW35 865 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CFAP52Q8N1V2 620 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 NAT16Q8N8M0 369 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 KYQ8NBH2 561 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 TSTD1Q8NFU3 115 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 OR13J1Q8NGT2 312 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 OR4L1Q8NH43 312 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 N4BP2L2Q92802 583 aaPredicted RBP12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 MYEOVQ96EZ4 313 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 UBXN10Q96LJ8 280 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 NUSAP1Q9BXS6 441 aaKnown RBP12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 EFCAB1Q9HAE3 211 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 PDFQ9HBH1 243 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 IGSF5Q9NSI5 407 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 MARK1Q9P0L2 795 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 VPS28Q9UK41 221 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 MYLKQ15746 1914 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 ASCC3Q8N3C0 2202 aaKnown RBP12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 THADAQ6YHU6 1953 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CHD5Q8TDI0 1954 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CACNA1EQ15878 2313 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 LAMA1P25391 3075 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 INSIG1O15503 277 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 HOXC11O43248 304 aaPredicted RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 LDB2O43679 373 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 GPC4O75487 556 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 S1PR4O95977 384 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 ATXN1LP0C7T5 689 aaKnown RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 GM2AP17900 193 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 BCKDHBP21953 392 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 MPSTP25325 297 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 PIK3R1P27986 724 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 SGSHP51688 502 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 ATP6V0D1P61421 351 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 RPS24P62847 133 aaKnown RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 XIAPP98170 497 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 NFKB2Q00653 900 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 LMAN2Q12907 356 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 ART3Q13508 389 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 SLC9B1Q4ZJI4 515 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 AARS2Q5JTZ9 985 aaKnown RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 MPP7Q5T2T1 576 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 NXNQ6DKJ4 435 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 ANO7Q6IWH7 933 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 RIPOR1Q6ZS17 1223 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 EFL1Q7Z2Z2 1120 aaKnown RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 METTL3Q86U44 580 aaKnown RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 FBXW8Q8N3Y1 598 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 HJURPQ8NCD3 748 aaPredicted RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 RHEBL1Q8TAI7 183 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 BLOC1S5Q8TDH9 187 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 ACDQ96AP0 544 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 L3HYPDHQ96EM0 354 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 PRICKLE1Q96MT3 831 aaPredicted RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 C19orf43Q9BQ61 176 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 NLE1Q9NVX2 485 aaPredicted RBP12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 SLC7A8Q9UHI5 535 aa12.79□□□□□ -0.36
SMARCB1-203ENST00000407082 ADAMTS20P59510 1910 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 A0A088AWK7 358 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 E9PBE3 544 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 GRID2O43424 1007 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 KLHL41O60662 606 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 VPS4BO75351 444 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 NDUFS3O75489 264 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 KRT36O76013 467 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 SBK3P0C264 359 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 CD9P21926 228 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 FDXRP22570 491 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 PSMA3P25788 255 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 HOXD9P28356 352 aaPredicted RBP12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 ACVRL1P37023 503 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 SLC6A11P48066 632 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 ATP4BP51164 291 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 SUOXP51687 545 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 ATXN3P54252 364 aaPredicted RBP12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 SEC13P55735 322 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 MRPS35P82673 323 aaKnown RBP12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 BTKQ06187 659 aa12.78□□□□□ -0.36
SMARCB1-203ENST00000407082 TBL3Q12788 808 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms