RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SARS2Q9NP81 518 aaKnown RBP20.2■□□□□ 0.82
CHKB-201ENST00000406938 TLK1Q9UKI8 766 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 CACNA1IQ9P0X4 2223 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 EML5Q05BV3 1969 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 MAP3K13O43283 966 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 VEGFDO43915 354 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 DNAJC6O75061 913 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 SPAG7O75391 227 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 TRIM16O95361 564 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 ASMTLO95671 621 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 TOP3BO95985 862 aaKnown RBP20.19■□□□□ 0.82
CHKB-201ENST00000406938 ZNF8P17098 575 aaPredicted RBP20.19■□□□□ 0.82
CHKB-201ENST00000406938 CD9P21926 228 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 PRLHRP49683 370 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 CLCN7P51798 805 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 IRF9Q00978 393 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 GTF2H3Q13889 308 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 LONP2Q86WA8 852 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 BANPQ8N9N5 519 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 CD200R1Q8TD46 325 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 ALKBH8Q96BT7 664 aaKnown RBP20.19■□□□□ 0.82
CHKB-201ENST00000406938 APOPT1Q96IL0 206 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 CABS1Q96KC9 395 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 BMFQ96LC9 184 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 PANX3Q96QZ0 392 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 SLC30A3Q99726 388 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 SLC13A1Q9BZW2 595 aa20.19■□□□□ 0.82
CHKB-201ENST00000406938 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.19■□□□□ 0.82
CHKB-201ENST00000406938 CACNB4O00305 520 aaPredicted RBP20.18■□□□□ 0.82
CHKB-201ENST00000406938 QSOX1O00391 747 aa20.18■□□□□ 0.82
CHKB-201ENST00000406938 WISP3O95389 354 aaPredicted RBP20.18■□□□□ 0.82
CHKB-201ENST00000406938 ZNF37AP17032 561 aaPredicted RBP20.18■□□□□ 0.82
CHKB-201ENST00000406938 PFN3P60673 137 aa20.18■□□□□ 0.82
CHKB-201ENST00000406938 TMEM207Q6UWW9 146 aa20.18■□□□□ 0.82
CHKB-201ENST00000406938 KYAT3Q6YP21 454 aaKnown RBP20.18■□□□□ 0.82
CHKB-201ENST00000406938 BEND7Q8N7W2 519 aaPredicted RBP20.18■□□□□ 0.82
CHKB-201ENST00000406938 HSPA12BQ96MM6 686 aa20.18■□□□□ 0.82
CHKB-201ENST00000406938 SSU72Q9NP77 194 aaKnown RBP20.18■□□□□ 0.82
CHKB-201ENST00000406938 MKS1Q9NXB0 559 aa20.18■□□□□ 0.82
CHKB-201ENST00000406938 TRMT6Q9UJA5 497 aaKnown RBP20.18■□□□□ 0.82
CHKB-201ENST00000406938 ACOT9Q9Y305 439 aa20.18■□□□□ 0.82
CHKB-201ENST00000406938 SLCO1B1Q9Y6L6 691 aa20.18■□□□□ 0.82
CHKB-201ENST00000406938 A0A087X1B8 175 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 MEI4A8MW99 385 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 COPEO14579 308 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 TYROBPO43914 113 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 NR1D1P20393 614 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 KIAA1024LP59773 190 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 BCL7AQ4VC05 210 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 UGT3A1Q6NUS8 523 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 TMEM220Q6QAJ8 160 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 CLEC14AQ86T13 490 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 TRAPPC5Q8IUR0 188 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 SELENOSQ9BQE4 189 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 SPATS2LQ9NUQ6 558 aaKnown RBP20.17■□□□□ 0.82
CHKB-201ENST00000406938 FBXO4Q9UKT5 387 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 HS3ST3A1Q9Y663 406 aa20.17■□□□□ 0.82
CHKB-201ENST00000406938 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 TMEM202A6NGA9 273 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 A6NNZ2 444 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 LILRB5O75023 590 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 FTH1P02794 183 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 CD27P26842 260 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 SKIV2L2P42285 1042 aaKnown RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 NFATC4Q14934 902 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 PAQR3Q6TCH7 311 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 CRTC3Q6UUV7 619 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 CDHR3Q6ZTQ4 885 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 ABI3BPQ7Z7G0 1075 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 TMEFF1Q8IYR6 380 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 CENPLQ8N0S6 344 aaPredicted RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 ANKRD49Q8WVL7 239 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 TSSK1BQ9BXA7 367 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 FAM126AQ9BYI3 521 aaPredicted RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 KCNK9Q9NPC2 374 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 EIF2B4Q9UI10 523 aaKnown RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 SMG5Q9UPR3 1016 aaKnown RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 ANKRD6Q9Y2G4 727 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 DHRS7Q9Y394 339 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 PCYT1BQ9Y5K3 369 aaPredicted RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 TMEM120BA0PK00 339 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 F8W8V4 182 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 CHUKO15111 745 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 PRPF4O43172 522 aaKnown RBP eCLIP20.16■□□□□ 0.825e-7■■□□□ 13.1
CHKB-201ENST00000406938 NUAK1O60285 661 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 MAGEC1O60732 1142 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 HOXC4P09017 264 aaPredicted RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 AVPR2P30518 371 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 CCR7P32248 378 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 PPP2R2AP63151 447 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 PPARDQ03181 441 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 TPRG1LQ5T0D9 272 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 NAPRTQ6XQN6 538 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 OTOAQ7RTW8 1153 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 CCDC91Q7Z6B0 441 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 TBC1D1Q86TI0 1168 aaPredicted RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 ZNF547Q8IVP9 402 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 PLD6Q8N2A8 252 aaKnown RBP20.16■□□□□ 0.82
CHKB-201ENST00000406938 SPATA6LQ8N4H0 392 aa20.16■□□□□ 0.82
CHKB-201ENST00000406938 ZBTB2Q8N680 514 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms