RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 BRSK1Q8TDC3 778 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.85□□□□□ -0.51
RBM39-206ENST00000403542 KIAA1191Q96A73 305 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 AURKBQ96GD4 344 aaPredicted RBP11.85□□□□□ -0.51
RBM39-206ENST00000403542 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 APOL5Q9BWW9 433 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 PCDH12Q9NPG4 1184 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 TMEM248Q9NWD8 314 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 PCTPQ9UKL6 214 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 INVSQ9Y283 1065 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 NT5C1B-RDH14C9J2C7 533 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 GNGT2O14610 69 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 DFNA5O60443 496 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 NOL3O60936 208 aaKnown RBP11.85□□□□□ -0.51
RBM39-206ENST00000403542 B3GALT4O96024 378 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 GPIP06744 558 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 AGXTP21549 392 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 MTHFRP42898 656 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 BMXP51813 675 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 MLLT10P55197 1068 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 HMGCS1Q01581 520 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 CD300CQ08708 224 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 RFTN2Q52LD8 501 aaPredicted RBP11.85□□□□□ -0.51
RBM39-206ENST00000403542 Q6ZSR9 355 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 GPRIN3Q6ZVF9 776 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 R3HCC1LQ7Z5L2 792 aaKnown RBP11.85□□□□□ -0.51
RBM39-206ENST00000403542 SPRED1Q7Z699 444 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 GPSM1Q86YR5 675 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 ZNF683Q8IZ20 524 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 SFRP1Q8N474 314 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 SLC15A4Q8N697 577 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 OR10A6Q8NH74 314 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 STON2Q8WXE9 905 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 SLC39A13Q96H72 371 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 ZNF599Q96NL3 588 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 BIRC8Q96P09 236 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 LHPPQ9H008 270 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 TFB2MQ9H5Q4 396 aaKnown RBP11.85□□□□□ -0.51
RBM39-206ENST00000403542 NTN4Q9HB63 628 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 FARSBQ9NSD9 589 aaKnown RBP11.85□□□□□ -0.51
RBM39-206ENST00000403542 TRMT13Q9NUP7 481 aaKnown RBP11.85□□□□□ -0.51
RBM39-206ENST00000403542 SELENONQ9NZV5 590 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 LIMD1Q9UGP4 676 aa11.85□□□□□ -0.51
RBM39-206ENST00000403542 CDH23Q9H251 3354 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 AXIN1O15169 862 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 FSHRP23945 695 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TPP2P29144 1249 aaPredicted RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 MC4RP32245 332 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 PIGAP37287 484 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 GTDC1Q4AE62 458 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 SLC44A4Q53GD3 710 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 NADSYN1Q6IA69 706 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 SPESP1Q6UW49 350 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 PLEKHA8Q96JA3 519 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TRIM62Q9BVG3 475 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TDRD1Q9BXT4 1180 aaKnown RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 TRIM54Q9BYV2 358 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 NACA2Q9H009 215 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 CRISPLD1Q9H336 500 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 IKZF5Q9H5V7 419 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TBC1D23Q9NUY8 699 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TRMT6Q9UJA5 497 aaKnown RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 H0Y858 1186 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 K7EPI3 171 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 MATN4O95460 622 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 ESRRBO95718 433 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 GSNP06396 782 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 IRF1P10914 325 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 SLC2A4P14672 509 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 HMOX2P30519 316 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 ARSFP54793 590 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 FOXD4Q12950 439 aaPredicted RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 MAPRE1Q15691 268 aaKnown RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 GTF3C2Q8WUA4 911 aaPredicted RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 SNX19Q92543 992 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 NCLNQ969V3 563 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 GLT1D1Q96MS3 346 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 PPP1R2P1Q96PQ5 205 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TSPAN18Q96SJ8 248 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TOR3AQ9H497 397 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 TLR9Q9NR96 1032 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 MRGBPQ9NV56 204 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 VAPAQ9P0L0 249 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.84□□□□□ -0.51
RBM39-206ENST00000403542 CIDEBQ9UHD4 219 aa11.84□□□□□ -0.51
RBM39-206ENST00000403542 M0QZQ0 153 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 ARVCFO00192 962 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 GSTA4O15217 222 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 TLR5O60602 858 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 FGF1P05230 155 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 CYP4B1P13584 511 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 CTPS1P17812 591 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 RPL38P63173 70 aaKnown RBP11.83□□□□□ -0.52
RBM39-206ENST00000403542 TWF1Q12792 350 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 NFATC3Q12968 1075 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 TRIM32Q13049 653 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 PRKG2Q13237 762 aa11.83□□□□□ -0.52
RBM39-206ENST00000403542 ABRAXAS2Q15018 415 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms