RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SLC20A2Q08357 652 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 TROAPQ12815 778 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 PSMD6Q15008 389 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 C1QTNF12Q5T7M4 302 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZDHHC20Q5W0Z9 365 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 DHRS7BQ6IAN0 325 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 FIGLAQ6QHK4 219 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF534Q76KX8 674 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 C1QL2Q7Z5L3 287 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLFN11Q7Z7L1 901 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 GLCCI1Q86VQ1 547 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 IQCHQ86VS3 1027 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMPRSS12Q86WS5 348 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 ADHFE1Q8IWW8 467 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 AFAP1Q8N556 730 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLC5A8Q8N695 610 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLC4A11Q8NBS3 891 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLC38A9Q8NBW4 561 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF114Q8NC26 417 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 OR2AJ1Q8NGZ0 328 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 OR52I2Q8NH67 350 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 TANKQ92844 425 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 MTBPQ96DY7 904 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 ERLEC1Q96DZ1 483 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 PRMT6Q96LA8 375 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 FER1L6-AS2Q96M78 137 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 OR1F2PQ96R84 312 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 C16orf70Q9BSU1 422 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 NAA11Q9BSU3 229 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 MMTAG2Q9BU76 263 aaKnown RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 C1QTNF7Q9BXJ2 289 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMEM39BQ9GZU3 492 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 MMP27Q9H306 513 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 OSER1Q9NX31 292 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 RHCGQ9UBD6 479 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 UBA2Q9UBT2 640 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 MALT1Q9UDY8 824 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 AMACRQ9UHK6 382 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 PCDHA7Q9UN72 937 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 OR2W1Q9Y3N9 320 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 PTPRCP08575 1304 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 NDUFS4O43181 175 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 CELF2O95319 508 aaKnown RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 PRSS2P07478 247 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 LINC00271P0C7V0 271 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 SRCP12931 536 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMPOP42166 694 aaKnown RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 CCR10P46092 362 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 POU5F1Q01860 360 aaKnown RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 RUNX1T1Q06455 604 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF155Q12901 538 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 MELKQ14680 651 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 CBWD6Q4V339 395 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 CBWD3Q5JTY5 395 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 C8orf82Q6P1X6 216 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 IL27RAQ6UWB1 636 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 SUSD1Q6UWL2 747 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 CCNI2Q6ZMN8 369 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 TPRG1Q6ZUI0 275 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 KRT77Q7Z794 578 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 SATL1Q86VE3 508 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 FBXL14Q8N1E6 418 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 CLIP4Q8N3C7 705 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 BBS10Q8TAM1 723 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 NEUROG1Q92886 237 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 ABTB1Q969K4 478 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 SIPA1Q96FS4 1042 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 FAM81BQ96LP2 452 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 QRFPRQ96P65 431 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 FCRL4Q96PJ5 515 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 DENND2DQ9H6A0 471 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLA2Q9H6Q3 261 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 TRMT1Q9NXH9 659 aaKnown RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 CCL27Q9Y4X3 112 aa3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMEM184BQ9Y519 407 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P17-201ENST00000403495 PRAG1Q86YV5 1406 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF644Q9H582 1327 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 A0A0G2JPF8 293 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 EDDM13A0A1B0GTR0 161 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 PRSS51A0A1B0GVH4 220 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 A0A1W2PPM1 405 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 FEZF1A0PJY2 475 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 HEPACAM2A8MVW5 462 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 HNRNPCL3B7ZW38 293 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 CCER2I3L3R5 266 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 TO15178 435 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 XRCC3O43542 346 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 RFPL2O75678 378 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 PENKP01210 267 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 KRT19P08727 400 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 HOXC6P09630 235 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 HNRNPCL4P0DMR1 293 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 CYP11B2P19099 503 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 NR2F2P24468 414 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 EEF1DP29692 281 aaKnown RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 FASLGP48023 281 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 AMPHP49418 695 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF41P51814 821 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 PGGT1BP53609 377 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 SIRPAP78324 504 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms