RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CHRAC1Q9NRG0 131 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 ZDHHC3Q9NYG2 299 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SLC2A6Q9UGQ3 507 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 COL27A1Q8IZC6 1860 aaPredicted RBP18.89■□□□□ 0.61
RTN4-207ENST00000402434 IGF2RP11717 2491 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 RHPN2P1A8MT19 583 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 C1QTNF9BB2RNN3 333 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 CFAP99D6REC4 459 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 C1QTNF9P0C862 333 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 RALBP11234 206 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 FOXN2P32314 431 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 PTGIRP43119 386 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 SARNPP82979 210 aaKnown RBP18.89■□□□□ 0.61
RTN4-207ENST00000402434 PLA2G4EQ3MJ16 856 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 BCL7AQ4VC05 210 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 FNBP1LQ5T0N5 605 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.89■□□□□ 0.61
RTN4-207ENST00000402434 AGAP9Q5VTM2 703 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 ANKRD22Q5VYY1 191 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 ARMC3Q5W041 872 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 ABRAXAS1Q6UWZ7 409 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 RBM44Q6ZP01 1051 aaKnown RBP18.89■□□□□ 0.61
RTN4-207ENST00000402434 MCUQ8NE86 351 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 GRAMD1AQ96CP6 724 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 DCUN1D1Q96GG9 259 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 LINC00615Q96LM1 132 aaPredicted RBP18.89■□□□□ 0.61
RTN4-207ENST00000402434 CNTNAP3BQ96NU0 1288 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 CNTNAP3Q9BZ76 1288 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 OSGEPL1Q9H4B0 414 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 TREX1Q9NSU2 369 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 DNAJC16Q9Y2G8 782 aa18.89■□□□□ 0.61
RTN4-207ENST00000402434 TRBV23OR9-2A0A075B6M9 112 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 KLHL33A6NCF5 533 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 TRABD2BA6NFA1 517 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 OR51F1A6NGY5 319 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 B4GAT1O43505 415 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 SNX2O60749 519 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 TMEM63AO94886 807 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 CAPNS1P04632 268 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 RPLP0P05388 317 aaKnown RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 PRSS56P0CW18 603 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 MLNP12872 115 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 ATP1B2P14415 290 aaPredicted RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 IDSP22304 550 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 PAFAH1B1P43034 410 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 CRADDP78560 199 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 SPIDRQ14159 915 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 ISXQ2M1V0 245 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 DET1Q7L5Y6 550 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 TAS2R42Q7RTR8 314 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 CAND1Q86VP6 1230 aaKnown RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 Q8N9G6 341 aaPredicted RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 GFM1Q96RP9 751 aaKnown RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 KIFC1Q9BW19 673 aa18.88■□□□□ 0.61
RTN4-207ENST00000402434 MRM3Q9HC36 420 aaKnown RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 SARS2Q9NP81 518 aaKnown RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 SCHIP1Q9P0W5 487 aaPredicted RBP18.88■□□□□ 0.61
RTN4-207ENST00000402434 MAP1BP46821 2468 aaKnown RBP18.87■□□□□ 0.61
RTN4-207ENST00000402434 MGAT4DA6NG13 374 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 CCDC188H7C350 402 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 CSO75390 466 aaKnown RBP18.87■□□□□ 0.61
RTN4-207ENST00000402434 GOT2P00505 430 aaKnown RBP18.87■□□□□ 0.61
RTN4-207ENST00000402434 BRAFP15056 766 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 XRCC1P18887 633 aaPredicted RBP18.87■□□□□ 0.61
RTN4-207ENST00000402434 MGAT1P26572 445 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 BIRC2Q13490 618 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 PTK6Q13882 451 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 PPP1R7Q15435 360 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 DBN1Q16643 649 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 AFTPHQ6ULP2 937 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 SLC9B2Q86UD5 537 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 BEND7Q8N7W2 519 aaPredicted RBP18.87■□□□□ 0.61
RTN4-207ENST00000402434 NAT8LQ8N9F0 302 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 AVL9Q8NBF6 648 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 NRSN2Q9GZP1 204 aa18.87■□□□□ 0.61
RTN4-207ENST00000402434 D6RAR5 112 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 ZW10O43264 779 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 AVILO75366 819 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 ALDH4A1P30038 563 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 CASQ1P31415 396 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 PRLHRP49683 370 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 PDX1P52945 283 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 TERF1P54274 439 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 OR1D5P58170 312 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 UBE2IP63279 158 aaKnown RBP18.86■□□□□ 0.61
RTN4-207ENST00000402434 HHEXQ03014 270 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 SQSTM1Q13501 440 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 METRNLQ641Q3 311 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 CERS6Q6ZMG9 384 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 OR2L2Q8NH16 312 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 OR4L1Q8NH43 312 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 NAT14Q8WUY8 206 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 RUNDC3BQ96NL0 473 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 XAB2Q9HCS7 855 aaKnown RBP18.86■□□□□ 0.61
RTN4-207ENST00000402434 SYBUQ9NX95 663 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 ZNF624Q9P2J8 865 aaPredicted RBP18.86■□□□□ 0.61
RTN4-207ENST00000402434 CPNE7Q9UBL6 633 aa18.86■□□□□ 0.61
RTN4-207ENST00000402434 PROS1P07225 676 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 RPL10P27635 214 aaKnown RBP18.85■□□□□ 0.61
RTN4-207ENST00000402434 NSG1P42857 185 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms