RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CCDC154A6NI56 674 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 CST1P01037 141 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 AASDHQ4L235 1098 aaPredicted RBP16.92■□□□□ 0.3
PTPRA-205ENST00000399903 CYHR1Q6ZMK1 362 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 ARHGAP36Q6ZRI8 547 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 PDZD4Q76G19 769 aaPredicted RBP16.92■□□□□ 0.3
PTPRA-205ENST00000399903 PPHLN1Q8NEY8 458 aaKnown RBP16.92■□□□□ 0.3
PTPRA-205ENST00000399903 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■■■■■ 31.4
PTPRA-205ENST00000399903 TMEM125Q96AQ2 219 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 PABPC5Q96DU9 382 aaKnown RBP16.92■□□□□ 0.3
PTPRA-205ENST00000399903 ZHX1-C8orf76Q96EF9 292 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 CEP295NLQ96MC4 621 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 RHNO1Q9BSD3 238 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 TLR9Q9NR96 1032 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 FAM118AQ9NWS6 357 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 LIMD1Q9UGP4 676 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 TSR3Q9UJK0 312 aaKnown RBP16.92■□□□□ 0.3
PTPRA-205ENST00000399903 SHROOM3Q8TF72 1996 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 CASTOR2A6NHX0 329 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 RRN3P2A6NIE6 340 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 H0Y626 953 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 CNTN5O94779 1100 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 TRIM16O95361 564 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 LTA4HP09960 611 aaKnown RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 JUNBP17275 347 aaPredicted RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 UFM1P61960 85 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 EMX1Q04741 257 aaPredicted RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 PSMD5Q16401 504 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 TECRLQ5HYJ1 363 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 TTC23Q5W5X9 447 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 CELF2-AS1Q8N7Q2 184 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 MED10Q9BTT4 135 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 NSMCE4AQ9NXX6 385 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 UTS2RQ9UKP6 389 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 CARD8Q9Y2G2 431 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 TTC24A2A3L6 582 aaPredicted RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 PDZK1P1A8MUH7 402 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 NOS2P35228 1153 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 UBXN11Q5T124 520 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 HFE2Q6ZVN8 426 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 ZNF467Q7Z7K2 595 aaPredicted RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 FAM86B1Q8N7N1 296 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 APPL2Q8NEU8 664 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 OR6Q1Q8NGQ2 317 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 OR13J1Q8NGT2 312 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 GTF3C2Q8WUA4 911 aaPredicted RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 NCLNQ969V3 563 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 DEPDC7Q96QD5 511 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 TSPAN18Q96SJ8 248 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 MAGEE1Q9HCI5 957 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 IGSF5Q9NSI5 407 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 PIGVQ9NUD9 493 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 TRIM64BA6NI03 449 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 ERI2A8K979 691 aaKnown RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 KCNK2O95069 426 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 CTGFP29279 349 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 EPS8Q12929 822 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 ZBTB6Q15916 424 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 HIST2H2ACQ16777 129 aaPredicted RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 CCDC58Q4VC31 144 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 RBM48Q5RL73 367 aaKnown RBP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 SNAP47Q5SQN1 464 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 STEAP3Q658P3 488 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 PKN3Q6P5Z2 889 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 CLYBLQ8N0X4 340 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 ELMOD1Q8N336 334 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 MINDY1Q8N5J2 469 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 MINDY2Q8NBR6 621 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 ESAMQ96AP7 390 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 HSFY1Q96LI6 401 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 DSN1Q9H410 356 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 GSTO2Q9H4Y5 243 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTPRA-205ENST00000399903 PMF1-BGLAPU3KQ54 211 aa16.91■□□□□ 0.3
PTPRA-205ENST00000399903 H0YAE9 185 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 SLC1A7O00341 560 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 ITKQ08881 620 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 FSCN1Q16658 493 aaKnown RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 LRRC49Q8IUZ0 686 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 ATP6V0D2Q8N8Y2 350 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 PROX1Q92786 737 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 SMOC2Q9H3U7 446 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 PAK1IP1Q9NWT1 392 aaPredicted RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 UBQLN1Q9UMX0 589 aaKnown RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 LOC100506127A0A0U1RQW1 187 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 BBIP1A8MTZ0 92 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 TNFRSF10AO00220 468 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 ALPLP05186 524 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 LBPP18428 481 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 MATKP42679 507 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 ARCN1P48444 511 aaKnown RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 MAP3K7CLP57077 242 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 E2F2Q14209 437 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 PKDCCQ504Y2 493 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 FAM98BQ52LJ0 330 aaKnown RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 TFAP2DQ7Z6R9 452 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 MUL1Q969V5 352 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 RIBC2Q9H4K1 309 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 RASSF1Q9NS23 344 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 C17orf102A2RUQ5 167 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms