RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 TMEM145Q8NBT3 493 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 CLHC1Q8NHS4 586 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 TEX47Q8TBZ9 253 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 CYB5D2Q8WUJ1 264 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 MMADHCQ9H3L0 296 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 ARHGAP20Q9P2F6 1191 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 PCDHA3Q9Y5H8 950 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 NFAT5O94916 1531 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 SIN3BO75182 1162 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 KLF8O95600 359 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 PTPN5P54829 565 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 RPS15P62841 145 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 GHRHRQ02643 423 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 SATL1Q86VE3 508 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 ZDHHC13Q8IUH4 622 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF398Q8TD17 642 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 SH3RF2Q8TEC5 729 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 MYDGFQ969H8 173 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 CIDECQ96AQ7 238 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 RPL10LQ96L21 214 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF350Q9GZX5 532 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 MRPS30Q9NP92 439 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-210ENST00000399606 A0A087WXM4 84 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 GLYATL1P3A0A0U1RQE8 302 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CIB4A0PJX0 185 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 SAGP10523 405 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 DDX6P26196 483 aaKnown RBP eCLIP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 OTX2P32243 289 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 SLC6A9P48067 706 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 VBP1P61758 197 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 TAPT1Q6NXT6 567 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 TRIM40Q6P9F5 258 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZPBP2Q6X784 338 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ADHFE1Q8IWW8 467 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 MAP3K3Q99759 626 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ANKHQ9HCJ1 492 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF224Q9NZL3 707 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 AP3M1Q9Y2T2 418 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 WASF2Q9Y6W5 498 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 PECAM1P16284 738 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF268Q14587 947 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 B3GNT6Q6ZMB0 384 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 VANGL1Q8TAA9 524 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 JPH3Q8WXH2 748 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF607Q96SK3 696 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 TMEM216Q9P0N5 145 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 MRASO14807 208 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 LSM1O15116 133 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 HCAR3P49019 387 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 MECP2P51608 486 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 NEK3P51956 506 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 FAM35AQ86V20 835 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 SLC26A11Q86WA9 606 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZMIZ2Q8NF64 920 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF296Q8WUU4 475 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 KLHL6Q8WZ60 621 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 PLEKHG4BQ96PX9 1271 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CRISPLD1Q9H336 500 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 PLCL2Q9UPR0 1127 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 TMEM131LA2VDJ0 1609 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 C5orf60A6NFR6 353 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 COL6A1P12109 1028 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 FKBP1AP62942 108 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 GRB10Q13322 594 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 NOXRED1Q6NXP6 359 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 RBFAQ8N0V3 343 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 FNIP1Q8TF40 1166 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 POF1BQ8WVV4 589 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CPNE1Q99829 537 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CCDC59Q9P031 241 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CYTH4Q9UIA0 394 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 HACD1B0YJ81 288 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF823P16415 610 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 GNB3P16520 340 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF16P17020 682 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CTBP2P56545 445 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 NFKB2Q00653 900 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 FAM183BPQ6ZVS7 135 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF720Q7Z2F6 126 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 NKAPQ8N5F7 415 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 KAT5Q92993 513 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CD101Q93033 1021 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 KLHDC7BQ96G42 594 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 NDNQ99608 321 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 OSBPL11Q9BXB4 747 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 LRMDAQ9H2I8 198 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 SRRDQ9UH36 339 aa10.88□□□□□ -0.67
CACNA1C-210ENST00000399606 EDARQ9UNE0 448 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms