RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ZNF514Q96K75 400 aaPredicted RBP14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 UBL7Q96S82 380 aaPredicted RBP14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 TBL1YQ9BQ87 522 aa14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 UGT1A7Q9HAW7 530 aa14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 UGT1A10Q9HAW8 530 aa14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 UGT1A8Q9HAW9 530 aa14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 R3HDM2Q9Y2K5 976 aaKnown RBP14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 DNMT3AQ9Y6K1 912 aaPredicted RBP14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 ATMQ13315 3056 aa14.64□□□□□ -0.07
SMIM11A-203ENST00000399299 CFAP46Q8IYW2 2715 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 SMG1Q96Q15 3661 aaKnown RBP14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 AGAP14A8MT82 685 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 GPR39O43194 453 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 PRAMEF1O95521 474 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 IDSP22304 550 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 MAPK10P53779 464 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 CXADRP78310 365 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 P3H1Q32P28 736 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 SOWAHCQ53LP3 525 aaPredicted RBP14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 SEL1L2Q5TEA6 688 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 TMEM164Q5U3C3 297 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 ZNF662Q6ZS27 426 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 RBM12BQ8IXT5 1001 aaKnown RBP14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 RCBTB1Q8NDN9 531 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 RTP4Q96DX8 246 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 APOL2Q9BQE5 337 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 FRMD8P1Q9BZ68 369 aaPredicted RBP14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 LRRC40Q9H9A6 602 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 POT1Q9NUX5 634 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 TMEM9Q9P0T7 183 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 SCHIP1Q9P0W5 487 aaPredicted RBP14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 GUCA1BQ9UMX6 200 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 DNAJC16Q9Y2G8 782 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 PCDHGA3Q9Y5H0 932 aa14.63□□□□□ -0.07
SMIM11A-203ENST00000399299 PRAMEF33A0A0G2JMD5 474 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 TCRBV7S2A1N4TA0A589 114 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 KLHL33A6NCF5 533 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 PDZK1P1A8MUH7 402 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 C9orf172C9J069 976 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 PRAMEF10O60809 474 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 SRP72O76094 671 aaKnown RBP14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 VIPP01282 170 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 LIPCP11150 499 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 BRAFP15056 766 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 CSTF2P33240 577 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 CA5AP35218 305 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 HADHAP40939 763 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 SLC19A1P41440 591 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 ZNF140P52738 457 aaPredicted RBP14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 CTSCP53634 463 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 GDF10P55107 478 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 XIAPP98170 497 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 VAC14Q08AM6 782 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 PTPRCAPQ14761 206 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 LONRF2Q1L5Z9 754 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 TMEM26Q6ZUK4 368 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 AMZ2Q86W34 360 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 RASGEF1AQ8N9B8 481 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 USP7Q93009 1102 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 TAAR9Q96RI9 348 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 TMEM121Q9BTD3 319 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 ZMYND15Q9H091 742 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 ZNF624Q9P2J8 865 aaPredicted RBP14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 FKBPLQ9UIM3 349 aa14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 MN1Q10571 1320 aaPredicted RBP14.62□□□□□ -0.07
SMIM11A-203ENST00000399299 B4E171 279 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 K7ENP7 123 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 PSMD3O43242 534 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 LDB2O43679 373 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 METTL18O95568 372 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 AP2A1O95782 977 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 FGF3P11487 239 aaPredicted RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 CCL4P13236 92 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 MSH3P20585 1137 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 STIP1P31948 543 aaKnown RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 TSPAN7P41732 249 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 HALP42357 657 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 PPM1FP49593 454 aaPredicted RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 SPARCL1Q14515 664 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 OASLQ15646 514 aaKnown RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 INO80CQ6PI98 192 aaPredicted RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 ARHGAP22Q7Z5H3 698 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 TRIM48Q8IWZ4 208 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 LSM14AQ8ND56 463 aaKnown RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 OR13C4Q8NGS5 318 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 NCSTNQ92542 709 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 ULK4Q96C45 1275 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 BBC3Q96PG8 261 aaPredicted RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 CCNL2Q96S94 520 aaPredicted RBP14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 DDA1Q9BW61 102 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 TBC1D10AQ9BXI6 508 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 ASB8Q9H765 288 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 CPNE5Q9HCH3 593 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 FOXJ2Q9P0K8 574 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 KCTD3Q9Y597 815 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 SDK2Q58EX2 2172 aa14.61□□□□□ -0.07
SMIM11A-203ENST00000399299 ERI2A8K979 691 aaKnown RBP14.6□□□□□ -0.07
SMIM11A-203ENST00000399299 H7C0S8 307 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms