RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RTP5Q14D33 572 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CYP1B1Q16678 543 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NKAIN2Q5VXU1 208 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 C4orf22Q6V702 233 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PIANPQ8IYJ0 282 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NXPE1Q8N323 547 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 OR13J1Q8NGT2 312 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 APC2O95996 2303 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CFAP47Q6ZTR5 3102 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TRBV5-4A0A0C4DH59 114 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 HEATR9A2RTY3 570 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 FANCGO15287 622 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SGTAO43765 313 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KRT14P02533 472 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 BRAFP15056 766 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SESN2P58004 480 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NFE2L1Q14494 772 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SKIDA1Q1XH10 827 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GPR33Q49SQ1 333 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 C3orf38Q5JPI3 329 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 FAM83HQ6ZRV2 1179 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TAS2R42Q7RTR8 314 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 AMZ2Q86W34 360 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SERPINA9Q86WD7 417 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PROSER1Q86XN7 944 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 C17orf53Q8N3J3 647 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NXPE2Q96DL1 559 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NUDT22Q9BRQ3 303 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 EIF2B3Q9NR50 452 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CHRAC1Q9NRG0 131 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CPNE7Q9UBL6 633 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 FAM8A1Q9UBU6 413 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 WDR37Q9Y2I8 494 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 IGHV1OR21-1A0A087WYE8 117 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PRAMEF33A0A0G2JMD5 474 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CCDC162PA2VCL2 907 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 OR52A4PA6NMU1 304 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CES2O00748 559 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 BRINP1O60477 761 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TCP1P17987 556 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 IDSP22304 550 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ADRA1DP25100 572 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PSMA3P25788 255 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ACRV1P26436 265 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CD1CP29017 333 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GPR3P46089 330 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GABREP78334 506 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CLCA4Q14CN2 919 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 FOXR1Q6PIV2 292 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF534Q76KX8 674 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 HDAC10Q969S8 669 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ULK4Q96C45 1275 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CAPZA3Q96KX2 299 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 RANBP9Q96S59 729 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SLC38A3Q99624 504 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 COPS8Q99627 209 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SARS2Q9NP81 518 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KCNK4Q9NYG8 393 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF624Q9P2J8 865 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PSMD13Q9UNM6 376 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NEU2Q9Y3R4 380 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TCAF1Q9Y4C2 921 aa13.85□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KIF26BQ2KJY2 2108 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ACACAQ13085 2346 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KIR2DS5A0A0G2JLQ3 304 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 A0A0G2JNG1 304 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KIR2DS3K7RE56 304 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PHF2O75151 1096 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 AVILO75366 819 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CPNE6O95741 557 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ATP1B2P14415 290 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 HOXB3P14651 431 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SLC2A4P14672 509 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 VCLP18206 1134 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 XRCC1P18887 633 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SLC19A1P41440 591 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 UBE2IP63279 158 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CFHR1Q03591 330 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CACNG1Q06432 222 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KCNJ11Q14654 390 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KIR2DS5Q14953 304 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 MAP9Q49MG5 647 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ANKRD22Q5VYY1 191 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PAPD7Q5XG87 772 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ABRAXAS1Q6UWZ7 409 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 XKR5Q6UX68 686 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF574Q6ZN55 896 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SLC9B2Q86UD5 537 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PIM3Q86V86 326 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 LILRA3Q8N6C8 439 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CLDN19Q8N6F1 224 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF514Q96K75 400 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NAPGQ99747 312 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 DDX47Q9H0S4 455 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SEMA6CQ9H3T2 930 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 POLR1BQ9H9Y6 1135 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms