RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 PTPRCAPQ14761 206 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 PPP1R3AQ16821 1122 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 BCL7AQ4VC05 210 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 ZFP1Q6P2D0 407 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 GPRIN3Q6ZVF9 776 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 NUDT18Q6ZVK8 323 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 MAPK15Q8TD08 544 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 OR8D1Q8WZ84 308 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 PRR11Q96HE9 360 aaPredicted RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 COPS8Q99627 209 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 NUF2Q9BZD4 464 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 TNKS2Q9H2K2 1166 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 CD274Q9NZQ7 290 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 ZIM2Q9NZV7 527 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 ARMCX1Q9P291 453 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 STX18Q9P2W9 335 aaKnown RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 BAIAP2L1Q9UHR4 511 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 COPG1Q9Y678 874 aaKnown RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 UBXN8O00124 270 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 SUPT7LO94864 414 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 CDK14O94921 469 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 PIRTP0C851 137 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 TIMP2P16035 220 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 LBPP18428 481 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 AP2B1P63010 937 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 SMAD1Q15797 465 aaKnown RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 FAM151BQ6UXP7 276 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 DNAJB8Q8NHS0 232 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 TWIST2Q8WVJ9 160 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 ASB16Q96NS5 453 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 BRINP2Q9C0B6 783 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 CCL22O00626 93 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 UGDHO60701 494 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 KATNA1O75449 491 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 CRCPO75575 148 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 PNLIPRP1P54315 467 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 FCHO2Q0JRZ9 810 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 C10orf62Q5T681 223 aaPredicted RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 HENMT1Q5T8I9 393 aaKnown RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 DPY19L3Q6ZPD9 716 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 TECPR1Q7Z6L1 1165 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 ELSPBP1Q96BH3 223 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 DUS3LQ96G46 650 aaKnown RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 DCUN1D1Q96GG9 259 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 METTL2AQ96IZ6 378 aaKnown RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 NTMT1Q9BV86 223 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 MRPL1Q9BYD6 325 aaKnown RBP7.29□□□□□ -1.24
RGPD1-201ENST00000398193 TRIM54Q9BYV2 358 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 BRD9Q9H8M2 597 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 BPIFA1Q9NP55 256 aa7.29□□□□□ -1.24
RGPD1-201ENST00000398193 GIPC1O14908 333 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 RFPL2O75678 378 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 PRAMEF12O95522 483 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 ATP1B2P14415 290 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 KCNA5P22460 613 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 AP1S2P56377 157 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 DPTQ07507 201 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 C8orf82Q6P1X6 216 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 EEF1AKMT1Q8WVE0 214 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 HOPXQ9BPY8 73 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 SLC12A9Q9BXP2 914 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 TM6SF2Q9BZW4 377 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 DENND2DQ9H6A0 471 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 MID1IP1Q9NPA3 183 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 CDH22Q9UJ99 828 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 HCFC2Q9Y5Z7 792 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 E9PBE3 544 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 UBFD1O14562 309 aaKnown RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 OR1I1O60431 355 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 KLHL41O60662 606 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 DNAJA2O60884 412 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 F7P08709 466 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 CHRM1P11229 460 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 IRS1P35568 1242 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 MTTPP55157 894 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 SF3A3Q12874 501 aaKnown RBP eCLIP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 RALGDSQ12967 914 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 TGFBIQ15582 683 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 TSNQ15631 228 aaKnown RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 RBBP7Q16576 425 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 PFKFB4Q16877 469 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 RARS2Q5T160 578 aaKnown RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 ANKRD54Q6NXT1 300 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 ZSWIM9Q86XI8 627 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 MIER2Q8N344 545 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 PHTF2Q8N3S3 785 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 SPATA6LQ8N4H0 392 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 CD244Q9BZW8 370 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 ZCCHC2Q9C0B9 1178 aaKnown RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 DNMT3AQ9Y6K1 912 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 NUP205Q92621 2012 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 E2F3O00716 465 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 NIPSNAP2O75323 286 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 GPC4O75487 556 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 SLC25A14O95258 325 aaPredicted RBP7.28□□□□□ -1.24
RGPD1-201ENST00000398193 EBLN1P0CF75 366 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 CYP2A7P20853 494 aa7.28□□□□□ -1.24
RGPD1-201ENST00000398193 AOAHP28039 575 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms