RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TEAD1P28347 426 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 TYK2P29597 1187 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 CD6P30203 668 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 NSG1P42857 185 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 PGGT1BP53609 377 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 RAB10P61026 200 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 IRF4Q15306 451 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 USP39Q53GS9 565 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 LDLRAP1Q5SW96 308 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 PHYKPLQ8IUZ5 450 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 COX14Q96I36 57 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 LENG8Q96PV6 779 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 SMC6Q96SB8 1091 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 C1QTNF7Q9BXJ2 289 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 CCDC68Q9H2F9 335 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 C6orf106Q9H6K1 298 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 SSU72Q9NP77 194 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 GNPTGQ9UJJ9 305 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 MTX2O75431 263 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC25A14O95258 325 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 WISP3O95389 354 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 MPOP05164 745 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 C2P06681 752 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC35E2BP0CK96 405 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 STMN1P16949 149 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 NR1D1P20393 614 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 SAT1P21673 171 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 CD9P21926 228 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 HPDP32754 393 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 IGFALSP35858 605 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 TRIM23P36406 574 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 PDE1CQ14123 709 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 ZNF460Q14592 562 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 ZNF648Q5T619 568 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 MACC1Q6ZN28 852 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 CLDN19Q8N6F1 224 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 BANPQ8N9N5 519 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 GDAP1Q8TB36 358 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 NAT14Q8WUY8 206 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 HEXDCQ8WVB3 486 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 ALKBH8Q96BT7 664 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 TSPAN17Q96FV3 270 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 PCMTD2Q9NV79 361 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 MKS1Q9NXB0 559 aa16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-205ENST00000397406 A0A096LPK6 155 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC31A1O15431 190 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 PRPF4O43172 522 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■■□□ 19.1
TSPAN4-205ENST00000397406 PHGDHO43175 533 aaKnown RBP16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 TYROBPO43914 113 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 NIPSNAP2O75323 286 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 IGHV4-34P06331 123 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 ATP1B2P14415 290 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 CRABP2P29373 138 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 AKT1P31749 480 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 GMPRP36959 345 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 CCR5P51681 352 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC12A2P55011 1212 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 INPP5AQ14642 412 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 PPM1JQ5JR12 505 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 KIAA0895LQ68EN5 471 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 TRIM74Q86UV6 250 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 PIM3Q86V86 326 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 HEATR4Q86WZ0 1026 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 KRT222Q8N1A0 295 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 DENND6BQ8NEG7 585 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 KCNJ9Q92806 393 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 APOPT1Q96IL0 206 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 HIC2Q96JB3 615 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 CABS1Q96KC9 395 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 TEX101Q9BY14 249 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 POPDC3Q9HBV1 291 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 FZD3Q9NPG1 666 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 TMEM74BQ9NUR3 256 aa16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 OAS3Q9Y6K5 1087 aaKnown RBP16.71■□□□□ 0.27
TSPAN4-205ENST00000397406 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 IQCF5A8MTL0 148 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 CFAP99D6REC4 459 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 H3BMM5 538 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 SGTAO43765 313 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 SPAG7O75391 227 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 RHOBTB1O94844 696 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 MSH3P20585 1137 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 LIMK1P53667 647 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 PPP2R2AP63151 447 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 CDK3Q00526 305 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM115Q12893 351 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 AASDHQ4L235 1098 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 PTRHD1Q6GMV3 140 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 CLEC14AQ86T13 490 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 SPNS2Q8IVW8 549 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEFF1Q8IYR6 380 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 LKAAEAR1Q8TD35 194 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 DCUN1D1Q96GG9 259 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 GPR174Q9BXC1 333 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 VPS11Q9H270 941 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 EBF2Q9HAK2 575 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 TAS2R13Q9NYV9 303 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 GALPQ9UBC7 116 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms