RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ACOT9Q9Y305 439 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 OAS3Q9Y6K5 1087 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 PRSS21Q9Y6M0 314 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 A0A096LPK6 155 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 A0A1W2PPM1 405 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 NIPSNAP2O75323 286 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 GSTA1P08263 222 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 PYGBP11216 843 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 CCT5P48643 541 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 CSRP3P50461 194 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 KPNA2P52292 529 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 THOP1P52888 689 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 CDKN2DP55273 166 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 OVGP1Q12889 678 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 PTK2BQ14289 1009 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 KHDC1Q4VXA5 237 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 DET1Q7L5Y6 550 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 TBC1D1Q86TI0 1168 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 TRIM74Q86UV6 250 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 IQCHQ86VS3 1027 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 RASGEF1AQ8N9B8 481 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 BMFQ96LC9 184 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 HSPA12BQ96MM6 686 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 OLFM1Q99784 485 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 IQCGQ9H095 443 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 LATS2Q9NRM7 1088 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 PCMTD2Q9NV79 361 aa23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 DNMT3AQ9Y6K1 912 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-202ENST00000397396 POM121BA6NF01 834 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 COPEO14579 308 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 NUAK1O60285 661 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 TRIM16O95361 564 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 C2P06681 752 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 CLDN2P57739 230 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 RACK1P63244 317 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 SLC18A2Q05940 514 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 TSNAXIP1Q2TAA8 658 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 LRRC8EQ6NSJ5 796 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 OTOAQ7RTW8 1153 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 LRRTM4Q86VH4 590 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 TRAPPC5Q8IUR0 188 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 NKAPQ8N5F7 415 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 ACVR1CQ8NER5 493 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 SGF29Q96ES7 293 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 APOPT1Q96IL0 206 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 LINC00615Q96LM1 132 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 WDR92Q96MX6 357 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 GPR21Q99679 349 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 LGR4Q9BXB1 951 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 VPS11Q9H270 941 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 EBF2Q9HAK2 575 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 AASDHPPTQ9NRN7 309 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 DCDC2Q9UHG0 476 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 SLC17A4Q9Y2C5 497 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 DHRS7Q9Y394 339 aa23.23■■□□□ 1.31
TSPAN4-202ENST00000397396 OR2AG2A6NM03 316 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 EIF3FO00303 357 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 TNFRSF10CO14798 259 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 CHUKO15111 745 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 GLRA3O75311 464 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 SLC35E2BP0CK96 405 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 BRAFP15056 766 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 ZNF8P17098 575 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 BCKDHBP21953 392 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 RGS4P49798 205 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 PLOD1Q02809 727 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 INSCQ1MX18 579 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 DOK6Q6PKX4 331 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 TMEM220Q6QAJ8 160 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 CEP97Q8IW35 865 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 C4orf33Q8N1A6 199 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 ARFGAP2Q8N6H7 521 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 OR56A4Q8NGH8 313 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 NELL1Q92832 810 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 INPP5DQ92835 1189 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 SKA1Q96BD8 255 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 CCDC97Q96F63 343 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 ORAI3Q9BRQ5 295 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 ZSCAN32Q9NX65 697 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 MED16Q9Y2X0 877 aa23.22■■□□□ 1.31
TSPAN4-202ENST00000397396 TTC28Q96AY4 2481 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 C17orf113A0A1B0GUU1 675 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 PHGDHO43175 533 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 KCNJ13O60928 360 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 APOA4P06727 396 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 CBSLP0DN79 551 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 ZNF37AP17032 561 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 CBSP35520 551 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 CLCN7P51798 805 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 PDE1CQ14123 709 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 FAM83EQ2M2I3 478 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 PLEKHS1Q5SXH7 462 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 ZNF648Q5T619 568 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 KLC3Q6P597 504 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 ZBTB2Q8N680 514 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 CD200R1Q8TD46 325 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 DNASE2BQ8WZ79 361 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 CCM2Q9BSQ5 444 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 SARS2Q9NP81 518 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 EIF2B4Q9UI10 523 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms