RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 A0A0J9YYE9 177 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 A0A1W2PQ45 241 aaPredicted RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 A0A1W2PQY0 241 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 METTL15A6NJ78 407 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 DDX39AO00148 427 aaKnown RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 DPYSL4O14531 572 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 XYLBO75191 536 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 DGAT1O75907 488 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 PDE9AO76083 593 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 EPN2O95208 641 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 F2P00734 622 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 LGALS2P05162 132 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 GSTM1P09488 218 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 CD19P15391 556 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 PDGFRAP16234 1089 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 CYP2A7P20853 494 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 PSMB9P28065 219 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 ETV6P41212 452 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 SLC15A1P46059 708 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 NPY2RP49146 381 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 RAB25P57735 213 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 VBP1P61758 197 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 GRIK2Q13002 908 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 USP10Q14694 798 aaKnown RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 IMPG1Q17R60 797 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 TBRG1Q3YBR2 411 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 ZC3H12BQ5HYM0 836 aaKnown RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 COLEC12Q5KU26 742 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 FAM102AQ5T9C2 384 aaPredicted RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 C1orf53Q5VUE5 145 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 TMEM236Q5W0B7 351 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 ZNF470Q6ECI4 717 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 SLC39A4Q6P5W5 647 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 STRADAQ7RTN6 431 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 VN1R5Q7Z5H4 357 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 STK32CQ86UX6 486 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 RETREG3Q86VR2 466 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 SNX29P2Q8IUI4 249 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 SYTL1Q8IYJ3 562 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 CADM2Q8N3J6 435 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 ZFAND1Q8TCF1 268 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 MCOLN3Q8TDD5 553 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 BPIFB1Q8TDL5 484 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 FAR1Q8WVX9 515 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 ZNF669Q96BR6 464 aaPredicted RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 LRRC58Q96CX6 371 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 MFSD3Q96ES6 412 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 VPS39Q96JC1 886 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 MAP6Q96JE9 813 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 GPR22Q99680 433 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 C16orf70Q9BSU1 422 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 C6orf62Q9GZU0 229 aaPredicted RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 RHOJQ9H4E5 214 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 NIPAL2Q9H841 368 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 ZNF556Q9HAH1 456 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 ZNF304Q9HCX3 659 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 EHD3Q9NZN3 535 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 INTS6Q9UL03 887 aaKnown RBP9.8□□□□□ -0.84
APTX-207ENST00000397172 TLR6Q9Y2C9 796 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 PCDHB3Q9Y5E6 796 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 PSAT1Q9Y617 370 aa9.8□□□□□ -0.84
APTX-207ENST00000397172 PTPRJQ12913 1337 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 TCRBV5S2A0A599 114 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 HAS3O00219 553 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 NR5A2O00482 541 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 NRP1O14786 923 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 PRSS23O95084 383 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 MATN4O95460 622 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 IFNA16P05015 189 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 PRKACAP17612 351 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 ETV1P50549 477 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 NRLP54845 237 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 SLC12A2P55011 1212 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 SOX10P56693 466 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 SP4Q02446 784 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 EMX1Q04741 257 aaPredicted RBP9.79□□□□□ -0.84
APTX-207ENST00000397172 BAMBIQ13145 260 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 PCSK7Q16549 785 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 ZIK1Q3SY52 487 aaPredicted RBP9.79□□□□□ -0.84
APTX-207ENST00000397172 FAM160B1Q5W0V3 765 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 CXCL17Q6UXB2 119 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 GDPD3Q7L5L3 318 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 SLC26A9Q7LBE3 791 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 RAVER1Q8IY67 606 aaKnown RBP9.79□□□□□ -0.84
APTX-207ENST00000397172 COLGALT1Q8NBJ5 622 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 PJA1Q8NG27 643 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 LHFPL5Q8TAF8 219 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 PAWRQ96IZ0 340 aaKnown RBP9.79□□□□□ -0.84
APTX-207ENST00000397172 RNF145Q96MT1 663 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 C17orf62Q9BQA9 187 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 B3GNT4Q9C0J1 378 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 TOR3AQ9H497 397 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 STARD7Q9NQZ5 370 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 AASDHPPTQ9NRN7 309 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 ERAP1Q9NZ08 941 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 DNAJB9Q9UBS3 223 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 EGFL7Q9UHF1 273 aa9.79□□□□□ -0.84
APTX-207ENST00000397172 DNMT3LQ9UJW3 386 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms