RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 RALGDSQ12967 914 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 ACOX1Q15067 660 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 TNFAIP8L3Q5GJ75 292 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 PIP5KL1Q5T9C9 394 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 LAYNQ6UX15 382 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 LIPIQ6XZB0 460 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 HSD11B1LQ7Z5J1 315 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 GALNT7Q86SF2 657 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 LDB1Q86U70 411 aaPredicted RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 TRABD2AQ86V40 505 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 SCG3Q8WXD2 468 aaKnown RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 PLEKHG4BQ96PX9 1271 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 SMC6Q96SB8 1091 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 TCF12Q99081 682 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 BTBD1Q9H0C5 482 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 RHOJQ9H4E5 214 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 FAM96AQ9H5X1 160 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 FBXL12Q9NXK8 326 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
SEC13-209ENST00000397117 FOXO6A8MYZ6 492 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 DFNA5O60443 496 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 NDUFS3O75489 264 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 HAUS5O94927 633 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 FOXN2P32314 431 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 ETV3P41162 512 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 ABCG1P45844 678 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 CBX1P83916 185 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 DNAJC3Q13217 504 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 NFATC2Q13469 925 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 TMEM52BQ4KMG9 183 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 RNF187Q5TA31 235 aaPredicted RBP13.11□□□□□ -0.31
SEC13-209ENST00000397117 DHRS13Q6UX07 377 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 SNX20Q7Z614 316 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 EXOC3L1Q86VI1 746 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 ZC3HC1Q86WB0 502 aaKnown RBP13.11□□□□□ -0.31
SEC13-209ENST00000397117 TMPRSS12Q86WS5 348 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 GPR26Q8NDV2 337 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 VPS39Q96JC1 886 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 CDH19Q9H159 772 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 FAM83DQ9H4H8 585 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 ASB8Q9H765 288 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 SGK2Q9HBY8 427 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 INTS10Q9NVR2 710 aaKnown RBP13.11□□□□□ -0.31
SEC13-209ENST00000397117 CD84Q9UIB8 345 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 NCKAP1Q9Y2A7 1128 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 FADS3Q9Y5Q0 445 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 ACTL7BQ9Y614 415 aa13.11□□□□□ -0.31
SEC13-209ENST00000397117 A0A1B0GTQ1 180 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 WNT9AO14904 365 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 SPINT1O43278 529 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 TSPAN6O43657 245 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 AP1G1O43747 822 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 LZTS3O60299 673 aaPredicted RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 FSBPO95073 299 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 PCDH8O95206 1070 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 S1PR4O95977 384 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 IGHV4-34P06331 123 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 PRSS56P0CW18 603 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 GABRB3P28472 473 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 DCDC1P59894 354 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 ITGA9Q13797 1035 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 SEMA3AQ14563 771 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CHRNA6Q15825 494 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 TYSND1Q2T9J0 566 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 GPR33Q49SQ1 333 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CCDC157Q569K6 752 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 AGBL4Q5VU57 503 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 LYPLAL1Q5VWZ2 237 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 Q6ZVL8 140 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 RAVER1Q8IY67 606 aaKnown RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 PIANPQ8IYJ0 282 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 NRSN1Q8IZ57 195 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 GPATCH11Q8N954 259 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 FAM76AQ8TAV0 307 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 ZNF398Q8TD17 642 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 MZB1Q8WU39 189 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 SPATA16Q9BXB7 569 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CRLS1Q9UJA2 301 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 MTO1Q9Y2Z2 717 aaKnown RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 UBA6A0AVT1 1052 aaPredicted RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 HMX2A2RU54 273 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 C10orf142B7Z368 130 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 GAPDHSO14556 408 aaPredicted RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 VILLO15195 856 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 MMP20O60882 483 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 C6P13671 934 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 BRAFP15056 766 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 KRT4P19013 534 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 NR1D1P20393 614 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 SAT1P21673 171 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 POLD2P49005 469 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CDKN1CP49918 316 aaPredicted RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 SERPINB8P50452 374 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms