RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 MED14O60244 1454 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 H3BQF6 201 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 PSMD9O00233 223 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TNFRSF10BO14763 440 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 GSC2O15499 205 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 DHFRP00374 187 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 MMP3P08254 477 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 PRKAR1AP10644 381 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 VBP1P61758 197 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ADAM8P78325 824 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 GTF2BQ00403 316 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 CACNG1Q06432 222 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 LRRC32Q14392 662 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 DLG2Q15700 870 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 HSDL1Q3SXM5 330 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SULT1C3Q6IMI6 304 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 WDR93Q6P2C0 686 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ZNF227Q86WZ6 799 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 POC5Q8NA72 575 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 OR7D4Q8NG98 312 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 OR4C6Q8NH72 309 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TNFAIP8L1Q8WVP5 186 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 NKD1Q969G9 470 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SLC25A36Q96CQ1 311 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SCLYQ96I15 445 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ZNF514Q96K75 400 aaPredicted RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 MNTQ99583 582 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 CHCHD6Q9BRQ6 235 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 RAB11FIP5Q9BXF6 653 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SEZ6LQ9BYH1 1024 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 BCO2Q9BYV7 579 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 STRADBQ9C0K7 418 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 COMMD4Q9H0A8 199 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 WDR26Q9H7D7 661 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 IL1RAPQ9NPH3 570 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ABCB10Q9NRK6 738 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SORCS3Q9UPU3 1222 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TULP4Q9NRJ4 1543 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 GCC2Q8IWJ2 1684 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 G3V2T6 193 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 CHST10O43529 356 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 WFS1O76024 890 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 KAT7O95251 611 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 CBX6O95503 412 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ITGAVP06756 1048 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 MTTPP55157 894 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ARF3P61204 181 aaPredicted RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 ARF1P84077 181 aaKnown RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 CHIT1Q13231 466 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TMEM119Q4V9L6 283 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 RHBDF2Q6PJF5 856 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TSHZ1Q6ZSZ6 1077 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 CCDC80Q76M96 950 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 DGLUCYQ7Z3D6 616 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 NETO2Q8NC67 525 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 P2RY11Q96G91 374 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TMEM68Q96MH6 324 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ACP6Q9NPH0 428 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 U3KQV3 271 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 PAPSS1O43252 624 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 IPO13O94829 963 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 NR2C1P13056 603 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ACP5P13686 325 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 MLLT3P42568 568 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 SLC1A5Q15758 541 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ZACNQ401N2 412 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 C5orf22Q49AR2 442 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 GCNT6Q5T4J0 391 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 LIPMQ5VYY2 423 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ANO7Q6IWH7 933 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ERICH5Q6P6B1 374 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 GPALPP1Q8IXQ4 340 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 GPR65Q8IYL9 337 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 PIGXQ8TBF5 258 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 PYDC1Q8WXC3 89 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 MBOAT7Q96N66 472 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 MRIQ9BWK5 157 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 TBC1D10AQ9BXI6 508 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 MAGEH1Q9H213 219 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 GPN1Q9HCN4 374 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 SLC2A4RGQ9NR83 387 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CENPMQ9NSP4 180 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 GTF2IRD1Q9UHL9 959 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 PACSIN3Q9UKS6 424 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 PCDHGC3Q9UN70 934 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 DERAQ9Y315 318 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 NPEPPSL1A6NEC2 478 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ENPP3O14638 875 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 HSPA12AO43301 675 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CDC40O60508 579 aaKnown RBP eCLIP7.12□□□□□ -1.27
UPF2-203ENST00000397053 PSMD10O75832 226 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CLDN9O95484 217 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CALCAP01258 141 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CYP4B1P13584 511 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ZNF8P17098 575 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 EPHA3P29320 983 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CDH4P55283 916 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CDKL1Q00532 357 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ARFRP1Q13795 201 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 PUM1Q14671 1186 aaKnown RBP eCLIP7.12□□□□□ -1.271e-7■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms