RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ARL1P40616 181 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 CRY1Q16526 586 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 TTC23Q5W5X9 447 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 RALGPS2Q86X27 583 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 AURKBQ96GD4 344 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 UBA6A0AVT1 1052 aaPredicted RBP23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 SUPT3HB4E1H0 165 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 SERPINB1P30740 379 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 NKX2-5P52952 324 aaPredicted RBP23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 FSCN1Q16658 493 aaKnown RBP23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 ADPRMQ3LIE5 342 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 TIGD5Q53EQ6 642 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 ATAD3BQ5T9A4 648 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 LINC00299Q6ZSB3 139 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 CIR1Q86X95 450 aaPredicted RBP23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 SMURF2Q9HAU4 748 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 FBXO8Q9NRD0 319 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 ITIH1P19827 911 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 EEFSECP57772 596 aaKnown RBP23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 KCNK10P57789 538 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 OR4D2P58180 307 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 GABARAPL2P60520 117 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 PPP1R8Q12972 351 aaKnown RBP23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 GLYATQ6IB77 296 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 ADCK1Q86TW2 530 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 PROSER1Q86XN7 944 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 CAPSLQ8WWF8 208 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 GLMNQ92990 594 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 TSPAN17Q96FV3 270 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 NSMCE2Q96MF7 247 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 NODALQ96S42 347 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 ACOX2Q99424 681 aa23.75■■□□□ 1.39
CSNK1E-203ENST00000396832 TBC1D4O60343 1298 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 S1PR4O95977 384 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 CDH1P12830 882 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 PCMT1P22061 227 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 IFITM2Q01629 132 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 GALNT3Q14435 633 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 SEMA3AQ14563 771 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 DGUOKQ16854 277 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 TMEM236Q5W0B7 351 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 ZNF549Q6P9A3 640 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 OR6Q1Q8NGQ2 317 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 OR13C4Q8NGS5 318 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 ALOXE3Q9BYJ1 711 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 UXTQ9UBK9 157 aaPredicted RBP23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 PMF1-BGLAPU3KQ54 211 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 ZNF99A8MXY4 864 aaPredicted RBP23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 E9PAM4 449 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 IRAK2O43187 625 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 FGF4P08620 206 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 UFM1P61960 85 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 CD47Q08722 323 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 DMPKQ09013 629 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 ILF2Q12905 390 aaKnown RBP23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 DNAJC14Q6Y2X3 702 aaPredicted RBP23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 ARMC8Q8IUR7 673 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 GPC2Q8N158 579 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 GABPB2Q8TAK5 448 aaPredicted RBP23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 HMCESQ96FZ2 354 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 RRN3P2A6NIE6 340 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 OR4Q2P0C623 313 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 CD1DP15813 335 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 HTR1EP28566 365 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 PIGAP37287 484 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 AAK1Q2M2I8 961 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 XKR4Q5GH76 650 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 KDELC1Q6UW63 502 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 ZDHHC13Q8IUH4 622 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 ZNF555Q8NEP9 628 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 TRIB2Q92519 343 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 AMBRA1Q9C0C7 1298 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 THG1LQ9NWX6 298 aaKnown RBP23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 GPR45Q9Y5Y3 372 aa23.74■■□□□ 1.39
CSNK1E-203ENST00000396832 NOBOXO60393 691 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 POMCP01189 267 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 AGTR2P50052 363 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 HIST2H2ACQ16777 129 aaPredicted RBP23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 LAIR2Q6ISS4 152 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 AKAP14Q86UN6 197 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 LRRTM3Q86VH5 581 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 CALML6Q8TD86 181 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 PSMG2Q969U7 264 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 RTP3Q9BQQ7 232 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 PRKD2Q9BZL6 878 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 CATSPERBQ9H7T0 1116 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 ZNF408Q9H9D4 720 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 PAK1IP1Q9NWT1 392 aaPredicted RBP23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 IKZF3Q9UKT9 509 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 HS3ST4Q9Y661 456 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 ENPP3O14638 875 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 SLC22A1O15245 554 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 SOAT2O75908 522 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 CNTN5O94779 1100 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 GABARAPO95166 117 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 MTHFRP42898 656 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 IST1P53990 364 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 VBP1P61758 197 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 ADAM17P78536 824 aa23.73■■□□□ 1.39
CSNK1E-203ENST00000396832 SLC13A2Q13183 592 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms