RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 NAV2Q8IVL1 2488 aa10.24□□□□□ -0.77
NEDD8-202ENST00000396828 A0A0J9YYE9 177 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 KCNK1O00180 336 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ERLIN1O75477 346 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 WISP1O95388 367 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 PRLP01236 227 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 TRBC1P01850 177 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 IVLP07476 585 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ZSCAN5DPP0CG00 497 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 CYP2A6P11509 494 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ETS1P14921 441 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 TNFRSF8P28908 595 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 RPL22P35268 128 aaKnown RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 HSPA9P38646 679 aaKnown RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ACTR1BP42025 376 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 GPR1P46091 355 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ACTR1AP61163 376 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 IFI35P80217 286 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 DSC2Q02487 901 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 KCNC4Q03721 635 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ITKQ08881 620 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 NAA30Q147X3 362 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 PYCR3Q53H96 274 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 TEX44Q53QW1 395 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ANKRD20A2Q5SQ80 823 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ARMC12Q5T9G4 340 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ANKRD20A1Q5TYW2 823 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ANKRD20A3Q5VUR7 823 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 PID1Q7Z2X4 250 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 EIF1ADQ8N9N8 165 aaKnown RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 CCDC110Q8TBZ0 833 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 SLC37A2Q8TED4 501 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.23□□□□□ -0.773e-6■■■□□ 18.4
NEDD8-202ENST00000396828 SEC14L1Q92503 715 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 COL26A1Q96A83 441 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 AP2M1Q96CW1 435 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 COX14Q96I36 57 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 SPATA13Q96N96 652 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 PPP1R2P1Q96PQ5 205 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 SLC12A9Q9BXP2 914 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 CLMPQ9H6B4 373 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 ARGLU1Q9NWB6 273 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 CNOT6Q9ULM6 557 aaKnown RBP10.23□□□□□ -0.77
NEDD8-202ENST00000396828 CHKBQ9Y259 395 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 SNX24Q9Y343 169 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 B3GALT1Q9Y5Z6 326 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 PTPN13Q12923 2485 aa10.23□□□□□ -0.77
NEDD8-202ENST00000396828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-202ENST00000396828 NBPF19A0A087WUL8 3843 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 A0A1W2PQ67 120 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ESYT3A0FGR9 886 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 A8MU76 341 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 E7EVH7 732 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 SMAPO00193 183 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 PSMD11O00231 422 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 INPP4BO15327 924 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 CLDN7O95471 211 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ITGB2P05107 769 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 THRAP10827 490 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 LIFP15018 202 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 PTPN3P26045 913 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 TEAD1P28347 426 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 UGT1A3P35503 534 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 FDFT1P37268 417 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 GPR3P46089 330 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 RPL21P46778 160 aaKnown RBP10.22□□□□□ -0.77
NEDD8-202ENST00000396828 LMAN1P49257 510 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 STC1P52823 247 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 BASP1P80723 227 aaKnown RBP10.22□□□□□ -0.77
NEDD8-202ENST00000396828 NIPAL4Q0D2K0 466 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 WASHC5Q12768 1159 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 PRPSAP1Q14558 356 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 PARP6Q2NL67 630 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 IZUMO3Q5VZ72 239 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ADAMTSL4Q6UY14 1074 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 PRUNE1Q86TP1 453 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 PPIL6Q8IXY8 311 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ZNF567Q8N184 647 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 BMPERQ8N8U9 685 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 GLIS1Q8NBF1 620 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 OR4D9Q8NGE8 314 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ARRDC2Q8TBH0 407 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ART4Q93070 314 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 RNF31Q96EP0 1072 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 AGAP3Q96P47 875 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 OR2M4Q96R27 311 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 TAAR9Q96RI9 348 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 CTRCQ99895 268 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ARHGAP9Q9BRR9 750 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 RIOK2Q9BVS4 552 aaKnown RBP10.22□□□□□ -0.77
NEDD8-202ENST00000396828 RAB6BQ9NRW1 208 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 RBM22Q9NW64 420 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEDD8-202ENST00000396828 KCNK4Q9NYG8 393 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 MTRF1LQ9UGC7 380 aaKnown RBP10.22□□□□□ -0.77
NEDD8-202ENST00000396828 RSPH14Q9UHP6 348 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 ANAPC5Q9UJX4 755 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 RAB21Q9UL25 225 aa10.22□□□□□ -0.77
NEDD8-202ENST00000396828 FADS2P1A8MWK0 482 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 BHMG1C9JSJ3 638 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms