RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 VPS33AQ96AX1 596 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 LRRC58Q96CX6 371 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 C1orf50Q9BV19 199 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 MRPL17Q9NRX2 175 aaKnown RBP16.36■□□□□ 0.21
TRIM39-205ENST00000396551 PCDHB1Q9Y5F3 818 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 CLDN7O95471 211 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 UFM1P61960 85 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 LMAN2Q12907 356 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 ZSWIM9Q86XI8 627 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 BBS7Q8IWZ6 715 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 HS6ST3Q8IZP7 471 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 VOPP1Q96AW1 172 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 C2orf49Q9BVC5 232 aaPredicted RBP16.36■□□□□ 0.21
TRIM39-205ENST00000396551 BRINP2Q9C0B6 783 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 CIPCQ9C0C6 399 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 ZFYVE1Q9HBF4 777 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 SPG21Q9NZD8 308 aa16.36■□□□□ 0.21
TRIM39-205ENST00000396551 SMIM18P0DKX4 95 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 GABRR2P28476 465 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 HNF1BP35680 557 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 VEGFBP49765 207 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 HTR6P50406 440 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 BCL2L1Q07817 233 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 RCAN2Q14206 197 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 ISLR2Q6UXK2 745 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 Q6ZSR9 355 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 EFL1Q7Z2Z2 1120 aaKnown RBP16.35■□□□□ 0.21
TRIM39-205ENST00000396551 FAM192AQ9GZU8 254 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 TNKS2Q9H2K2 1166 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 NOL11Q9H8H0 719 aaKnown RBP16.35■□□□□ 0.21
TRIM39-205ENST00000396551 COQ10BQ9H8M1 238 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 SLC24A3Q9HC58 644 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 CNOT11Q9UKZ1 510 aaKnown RBP16.35■□□□□ 0.21
TRIM39-205ENST00000396551 TBX21Q9UL17 535 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 PIKFYVEQ9Y2I7 2098 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 C1orf232A0A0U1RR37 186 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 CHEK2O96017 543 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 UGT1A6P19224 532 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 UGT1A1P22309 533 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 UGT1A4P22310 534 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 RPS3P23396 243 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRIM39-205ENST00000396551 UGT1A3P35503 534 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 UGT1A5P35504 534 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 GRIA3P42263 894 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 MAP7D1Q3KQU3 841 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 MTX3Q5HYI7 312 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 COQ5Q5HYK3 327 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 PAGE3Q5JUK9 113 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 RETSATQ6NUM9 610 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 PRMT9Q6P2P2 845 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 CERS6Q6ZMG9 384 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 AMIGO2Q86SJ2 522 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 OR2T34Q8NGX1 318 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 OR2T3Q8NH03 318 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 CANT1Q8WVQ1 401 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 RNF208Q9H0X6 261 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 ASB8Q9H765 288 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 IL26Q9NPH9 171 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 INTS6Q9UL03 887 aaKnown RBP16.35■□□□□ 0.21
TRIM39-205ENST00000396551 PCDHA9Q9Y5H5 950 aa16.35■□□□□ 0.21
TRIM39-205ENST00000396551 A0A1W2PP18 115 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 C7orf72A4D263 438 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 OR7A17O14581 309 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 HSD17B1P14061 328 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 IL12AP29459 219 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 CD70P32970 193 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 PCBP2Q15366 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM39-205ENST00000396551 C6orf136Q5SQH8 315 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 PTRHD1Q6GMV3 140 aaKnown RBP16.34■□□□□ 0.21
TRIM39-205ENST00000396551 GOLGA7Q7Z5G4 137 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 CLDN19Q8N6F1 224 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM39-205ENST00000396551 CNBD2Q96M20 576 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TSC22D3Q99576 134 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 C17orf80Q9BSJ5 609 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 CLPBQ9H078 707 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 CFAP97Q9P2B7 532 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 EGFL7Q9UHF1 273 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-205ENST00000396551 CCL5P13501 91 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 ZNF7P17097 686 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-205ENST00000396551 BPIP17213 487 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 ERVK-8P63133 956 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 NFATC2Q13469 925 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 LIN52Q52LA3 116 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TPGS1Q6ZTW0 290 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 ZUFSPQ96AP4 578 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 PBXIP1Q96AQ6 731 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 EME1Q96AY2 570 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 Q9H521 79 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 GID8Q9NWU2 228 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 SNX13Q9Y5W8 968 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 PLXNB3Q9ULL4 1909 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TRBV5-4A0A0C4DH59 114 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 LILRB3O75022 631 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TIPRLO75663 272 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 IRX1P78414 480 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-205ENST00000396551 GRIK2Q13002 908 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 NRF1Q16656 503 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 DGKKQ5KSL6 1271 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms