RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PDPK2PQ6A1A2 396 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 KYAT3Q6YP21 454 aaKnown RBP17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 DPY19L3Q6ZPD9 716 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 OTOAQ7RTW8 1153 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 TRPM8Q7Z2W7 1104 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 CNTN4Q8IWV2 1026 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 PPHLN1Q8NEY8 458 aaKnown RBP17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 ZNF778Q96MU6 729 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 TNKS2Q9H2K2 1166 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 FZD3Q9NPG1 666 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 DYRK4Q9NR20 520 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 C20orf96Q9NUD7 363 aaPredicted RBP17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 IL36AQ9UHA7 158 aa17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 ZFR2Q9UPR6 939 aaKnown RBP17.33■□□□□ 0.37
TNFSF13-205ENST00000396545 HELZ2Q9BYK8 2649 aaKnown RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 WDR91A4D1P6 747 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 MUSKO15146 869 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 TLX3O43711 291 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 GLRA3O75311 464 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 LEFTY1O75610 366 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 AKT2P31751 481 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 ABCG1P45844 678 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 INSM1Q01101 510 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 SEMG2Q02383 582 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 ARSIQ5FYB1 569 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 SEL1L3Q68CR1 1132 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 GCNT7Q6ZNI0 430 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 NLRP9Q7RTR0 991 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 STRA8Q7Z7C7 330 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 ABI3BPQ7Z7G0 1075 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 SLC22A18ASQ8N1D0 253 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 DCBLD1Q8N8Z6 715 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 OR13H1Q8NG92 308 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 OR4C6Q8NH72 309 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 PPP1R16AQ96I34 528 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 AGAP2Q99490 1192 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 SLC13A1Q9BZW2 595 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 CEP44Q9C0F1 390 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 ACTR5Q9H9F9 607 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 TREX1Q9NSU2 369 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 UCKL1Q9NWZ5 548 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 WASF2Q9Y6W5 498 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 NDST3O95803 873 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 EIF2S3P41091 472 aaKnown RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 RECQLP46063 649 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 RHOAP61586 193 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 SF3A3Q12874 501 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 MSLNQ13421 630 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 PDE1CQ14123 709 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 IHHQ14623 411 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 INSCQ1MX18 579 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 HSP90AA5PQ58FG0 334 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 TRIM42Q8IWZ5 723 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 CCDC63Q8NA47 563 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 RAB3IL1Q8TBN0 382 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 PEX13Q92968 403 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 SIRPGQ9P1W8 387 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 KLHL14Q9P2G3 628 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 CLCA2Q9UQC9 943 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 AK5Q9Y6K8 562 aa17.32■□□□□ 0.36
TNFSF13-205ENST00000396545 MGAQ8IWI9 3026 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 CFAP46Q8IYW2 2715 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 HEATR9A2RTY3 570 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 BIRC5O15392 142 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 PCDH8O95206 1070 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 GSTA1P08263 222 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 GIMD1P0DJR0 217 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 PAMP19021 973 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 ITGB7P26010 798 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 ITPKBP27987 946 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 CHRNA4P43681 627 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 ARCN1P48444 511 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 CSRP3P50461 194 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 SCNN1BP51168 640 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 CLDN2P57739 230 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 POU6F1Q14863 301 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 PCSK7Q16549 785 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 SPRED3Q2MJR0 410 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 PCDH20Q8N6Y1 951 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 ARMC2Q8NEN0 867 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 SNIP1Q8TAD8 396 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 ZNF398Q8TD17 642 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 ADGRE3Q9BY15 652 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 NOD2Q9HC29 1040 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 GPR27Q9NS67 375 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 IARS2Q9NSE4 1012 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 ABCF3Q9NUQ8 709 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 LHX3Q9UBR4 397 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 DCDC2Q9UHG0 476 aa17.31■□□□□ 0.36
TNFSF13-205ENST00000396545 TRPM6Q9BX84 2022 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 FFAR2O15552 330 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 PIAS2O75928 621 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 BPGMP07738 259 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 ARNTP27540 789 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 HADHAP40939 763 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 SERPINB8P50452 374 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 PDE1BQ01064 536 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 E2F1Q01094 437 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms