RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 LCA5LO95447 670 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 SOD1P00441 154 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TNFP01375 233 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 PCCBP05166 539 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 IVLP07476 585 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 CCNB1P14635 433 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 KDELR1P24390 212 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 UCNP55089 124 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 CLDN6P56747 220 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TAS2R40P59535 323 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 PPIDQ08752 370 aaKnown RBP6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TBX2Q13207 712 aaPredicted RBP6.1□□□□□ -1.43
PTPN20-208ENST00000395727 ARHGEF7Q14155 803 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 HLTFQ14527 1009 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TAZQ16635 292 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 CDKN3Q16667 212 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
PTPN20-208ENST00000395727 RNF111Q6ZNA4 994 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TECPR1Q7Z6L1 1165 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 CLEC14AQ86T13 490 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 NRSN1Q8IZ57 195 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 PQLC3Q8N755 202 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 PLD5Q8N7P1 536 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 KYQ8NBH2 561 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 KCTD6Q8NC69 237 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 LRRN4CLQ8ND94 238 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 KIAA1524Q8TCG1 905 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 HNRNPLLQ8WVV9 542 aaKnown RBP6.1□□□□□ -1.43
PTPN20-208ENST00000395727 OR1E3Q8WZA6 343 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TSACCQ96A04 125 aaPredicted RBP6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TMEM159Q96B96 161 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TADA1Q96BN2 335 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 OLFM3Q96PB7 478 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 RNF157Q96PX1 679 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 SEMA3CQ99985 751 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 CCDC3Q9BQI4 270 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 PACSIN1Q9BY11 444 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 DPH1Q9BZG8 443 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 B3GNT4Q9C0J1 378 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 CDH19Q9H159 772 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 ABCG4Q9H172 646 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 TSPY26PQ9H489 355 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 DEF6Q9H4E7 631 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 CAAP1Q9H8G2 361 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 NT5MQ9NPB1 228 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 THSD1Q9NS62 852 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 DDX56Q9NY93 547 aaKnown RBP6.1□□□□□ -1.43
PTPN20-208ENST00000395727 DTLQ9NZJ0 730 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 WHRNQ9P202 907 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 VPS18Q9P253 973 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 GPR34Q9UPC5 381 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 SLC17A4Q9Y2C5 497 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 PCDHB1Q9Y5F3 818 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 RAI2Q9Y5P3 530 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 WDFY3Q8IZQ1 3526 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 SPEGQ15772 3267 aa6.1□□□□□ -1.43
PTPN20-208ENST00000395727 APC2O95996 2303 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 A0A1W2PNU3 283 aaPredicted RBP6.09□□□□□ -1.43
PTPN20-208ENST00000395727 CPED1A4D0V7 1026 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 AKR1B10O60218 316 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 PRLP01236 227 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 PRKCGP05129 697 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 ITGA2BP08514 1039 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 ZFXP17010 805 aaPredicted RBP6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SLC1A1P43005 524 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 GPR3P46089 330 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 STC1P52823 247 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 DCDC1P59894 354 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 MAXP61244 160 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 GABREP78334 506 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 CDK3Q00526 305 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SEMG2Q02383 582 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 GBE1Q04446 702 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 TLE3Q04726 772 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 ILF3Q12906 894 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SLC10A2Q12908 348 aaPredicted RBP6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SQSTM1Q13501 440 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 C1orf61Q13536 156 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SPIDRQ14159 915 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 IHHQ14623 411 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 ACOX1Q15067 660 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 FXNQ16595 210 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 ATP13A4Q4VNC1 1196 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 C14orf28Q4W4Y0 310 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 LRRC66Q68CR7 880 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 KCTD16Q68DU8 428 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 Q6ZVL8 140 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 HSD11B1LQ7Z5J1 315 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SPRED1Q7Z699 444 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 HEATR4Q86WZ0 1026 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 CCDC13Q8IYE1 715 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 PELI3Q8N2H9 469 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 WDR36Q8NI36 951 aaKnown RBP6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SLC35G2Q8TBE7 412 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 PRR11Q96HE9 360 aaPredicted RBP6.09□□□□□ -1.43
PTPN20-208ENST00000395727 COX14Q96I36 57 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 CCDC42Q96M95 316 aa6.09□□□□□ -1.43
PTPN20-208ENST00000395727 ZNF830Q96NB3 372 aaPredicted RBP6.09□□□□□ -1.43
PTPN20-208ENST00000395727 SLC46A1Q96NT5 459 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms