RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 IL1RAPL1Q9NZN1 696 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 FAM8A1Q9UBU6 413 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 MAD1L1Q9Y6D9 718 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 SPEGQ15772 3267 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 POP7O75817 140 aaKnown RBP19.6■□□□□ 0.73
SNCA-203ENST00000394986 VAPBO95292 243 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 RALBP11234 206 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 ATP1B2P14415 290 aaPredicted RBP19.6■□□□□ 0.73
SNCA-203ENST00000394986 RPIAP49247 311 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 DUSP3P51452 185 aaPredicted RBP19.6■□□□□ 0.73
SNCA-203ENST00000394986 SEPT7Q16181 437 aaKnown RBP19.6■□□□□ 0.73
SNCA-203ENST00000394986 C14orf28Q4W4Y0 310 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 FASTKD1Q53R41 847 aaKnown RBP19.6■□□□□ 0.73
SNCA-203ENST00000394986 MAATS1Q7Z4T9 603 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 CHCHD4Q8N4Q1 142 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 CLDN19Q8N6F1 224 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 ZNF669Q96BR6 464 aaPredicted RBP19.6■□□□□ 0.73
SNCA-203ENST00000394986 ERP44Q9BS26 406 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 NCKIPSDQ9NZQ3 722 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 RABGEF1Q9UJ41 708 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 ANAPC5Q9UJX4 755 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 PRSS21Q9Y6M0 314 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 NCOR2Q9Y618 2525 aa19.6■□□□□ 0.73
SNCA-203ENST00000394986 EME2A4GXA9 379 aaPredicted RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 CFAP99D6REC4 459 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 OR1I1O60431 355 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 ADRB1P08588 477 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 HLTFQ14527 1009 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNCA-203ENST00000394986 BBS9Q3SYG4 887 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 ANKRD20A4Q4UJ75 823 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 FAM83HQ6ZRV2 1179 aaPredicted RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 ERMP1Q7Z2K6 904 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNCA-203ENST00000394986 CATSPERZQ9NTU4 200 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 PCDHGA1Q9Y5H4 931 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 RPS6KL1Q9Y6S9 549 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 RNF215Q9Y6U7 377 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 FAM237BA0A1B0GVD1 139 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 A6NCN8 305 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 PRR19A6NJB7 356 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 HYAL3O43820 417 aaPredicted RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 SPINK2P20155 84 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 DRG2P55039 364 aaKnown RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 NFE2L1Q14494 772 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 BCL7AQ4VC05 210 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 HP1BP3Q5SSJ5 553 aaPredicted RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 KIAA0930Q6ICG6 404 aaPredicted RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 AMZ2Q86W34 360 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 C17orf82Q86X59 251 aaPredicted RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 ADAMTS14Q8WXS8 1223 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 CCDC74AQ96AQ1 378 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 STAMBPL1Q96FJ0 436 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 EVA1BQ9NVM1 165 aa19.59■□□□□ 0.73
SNCA-203ENST00000394986 SCHIP1Q9P0W5 487 aaPredicted RBP19.59■□□□□ 0.73
SNCA-203ENST00000394986 ZCWPW2A0A1B0GU75 182 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 PDZK1P1A8MUH7 402 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 CD3EAPO15446 510 aaKnown RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 RPL10P27635 214 aaKnown RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 ARCN1P48444 511 aaKnown RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 PRLHRP49683 370 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 CLCNKAP51800 687 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 ITIH4Q14624 930 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 TRADDQ15628 312 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 DNAJC21Q5F1R6 531 aaKnown RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 DUPD1Q68J44 220 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 XKR5Q6UX68 686 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 RAB44Q7Z6P3 723 aaPredicted RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 MARCH9Q86YJ5 346 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 IGDCC3Q8IVU1 814 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 ARL14Q8N4G2 192 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 LILRA3Q8N6C8 439 aaPredicted RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 OTUD6BQ8N6M0 293 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 NOA1Q8NC60 698 aaKnown RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 SLC37A2Q8TED4 501 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 HEXDCQ8WVB3 486 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 SGSM3Q96HU1 749 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 ZNF514Q96K75 400 aaPredicted RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 CCDC3Q9BQI4 270 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 WDR83Q9BRX9 315 aaKnown RBP19.58■□□□□ 0.72
SNCA-203ENST00000394986 GRHL1Q9NZI5 618 aa19.58■□□□□ 0.72
SNCA-203ENST00000394986 F7P08709 466 aaPredicted RBP19.57■□□□□ 0.72
SNCA-203ENST00000394986 F3P13726 295 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 SLC7A5Q01650 507 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 ILKQ13418 452 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 C8orf74Q6P047 294 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 TMEM135Q86UB9 458 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 UNC5BQ8IZJ1 945 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 SFRP1Q8N474 314 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 NAT6Q93015 286 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 LRRC1Q9BTT6 524 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 WDR37Q9Y2I8 494 aa19.57■□□□□ 0.72
SNCA-203ENST00000394986 MAGEB16A2A368 324 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 BRAFP15056 766 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 VCLP18206 1134 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 PAMP19021 973 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 PMLP29590 882 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 NSG1P42857 185 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 TUBB2AQ13885 445 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 HIF1AQ16665 826 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 AARS2Q5JTZ9 985 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms