RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 HOXC13P31276 330 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 SPAM1P38567 509 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 PREPP48147 710 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 RPIAP49247 311 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 PLOD1Q02809 727 aaPredicted RBP15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 ATP13A5Q4VNC0 1218 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 TCEAL5Q5H9L2 206 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF678Q5SXM1 525 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 MMAAQ8IVH4 418 aaKnown RBP15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 TCEAL8Q8IYN2 117 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 DCAF4L2Q8NA75 395 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 UCMAQ8WVF2 138 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 ZSWIM3Q96MP5 696 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 TRBV23OR9-2A0A075B6M9 112 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 CPSF4O95639 269 aaKnown RBP15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 ESRRBO95718 433 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 NTRK1P04629 796 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 CTSAP10619 480 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 IGFBP4P22692 258 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 TGFBIQ15582 683 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 SLC44A2Q8IWA5 706 aaPredicted RBP15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 OR10Q1Q8NGQ4 319 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 IL26Q9NPH9 171 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 RIC8BQ9NVN3 520 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 NLE1Q9NVX2 485 aaPredicted RBP15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 GNPTGQ9UJJ9 305 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 DTNAQ9Y4J8 743 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 A0A1B0GTL3 188 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 CCDC154A6NI56 674 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 CCDC85CA6NKD9 419 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 E7ENX8 843 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 PGLSO95336 258 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 PRLP01236 227 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 DGKAP23743 735 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 DGKGP49619 791 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 MED21Q13503 144 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 MYLK3Q32MK0 819 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 FAM109BQ6ICB4 259 aaPredicted RBP15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 FBXW8Q8N3Y1 598 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 ITFG1Q8TB96 612 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 ACDQ96AP0 544 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 NSMCE3Q96MG7 304 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF599Q96NL3 588 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 RIOK2Q9BVS4 552 aaKnown RBP15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 PARVBQ9HBI1 364 aa15.71■□□□□ 0.11
SMARCD1-202ENST00000394963 IGLV3-10A0A075B6K4 115 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 NRP2O60462 931 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 ABLIM3O94929 683 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 OR56A5P0C7T3 313 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 MSLNQ13421 630 aaPredicted RBP15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 GPM6BQ13491 265 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 FRG1Q14331 258 aaKnown RBP15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 C22orf39Q6P5X5 142 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 LSMEM2Q8N112 164 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 SCML4Q8N228 414 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 RP9Q8TA86 221 aaKnown RBP15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 PNPT1Q8TCS8 783 aaKnown RBP15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 IRF7Q92985 503 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 DNAJC15Q9Y5T4 150 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 PRSS21Q9Y6M0 314 aa15.71■□□□□ 0.1
SMARCD1-202ENST00000394963 SBK3P0C264 359 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 BPIP17213 487 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 AP1S1P61966 158 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 LCP2Q13094 533 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.17e-8■■■□□ 17
SMARCD1-202ENST00000394963 SLC22A15Q8IZD6 547 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 FIG4Q92562 907 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 AP2M1Q96CW1 435 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 VPS50Q96JG6 964 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 FAR2Q96K12 515 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 MTERF1Q99551 399 aaKnown RBP15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 C1QTNF1Q9BXJ1 281 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 FAM83DQ9H4H8 585 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 DEC1Q9P2X7 70 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 ENO4A6NNW6 628 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 E2F6O75461 281 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 SRCP12931 536 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 VCLP18206 1134 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 IL23RQ5VWK5 629 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 ANKRD33Q7Z3H0 272 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 SPPL2CQ8IUH8 684 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 TMEM74Q96NL1 305 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 EFHD1Q9BUP0 239 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 EBPLQ9BY08 206 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 WASH4PA8MWX3 477 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 ULK1O75385 1050 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 TIPRLO75663 272 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 POLR2LP62875 67 aaKnown RBP15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 NFATC2Q13469 925 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 NCEH1Q6PIU2 408 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 SUSD6Q92537 303 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 LPGAT1Q92604 370 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 CACNA2D2Q9NY47 1150 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 LNPEPQ9UIQ6 1025 aa15.7■□□□□ 0.1
SMARCD1-202ENST00000394963 STATHP02808 62 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 HSPA1AP0DMV8 641 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 HSPA1BP0DMV9 641 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 EPB42P16452 691 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 PTGER3P43115 390 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 HTR6P50406 440 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms