RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 DNAJC15Q9Y5T4 150 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 CCDC162PA2VCL2 907 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 ANKRD33BA6NCL7 494 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 A6NL46 340 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 PGLSO95336 258 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 SERPINF2P08697 491 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 HSPA7P48741 367 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 TNK2Q07912 1038 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
NFKB1-202ENST00000394820 TMEM102Q8N9M5 508 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-202ENST00000394820 STAG3L4Q8TBR4 150 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 VAT1Q99536 393 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-202ENST00000394820 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 H3BMQ9 156 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 CYBBP04839 570 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 FCGR1AP12314 374 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 AGXTP21549 392 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 HALP42357 657 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 MAGEA3P43357 314 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 CLCN5P51795 746 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 NUDT6P53370 316 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 C18orf21Q32NC0 220 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-202ENST00000394820 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 TRPV1Q8NER1 839 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 COG8Q96MW5 612 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 SLC2A13Q96QE2 648 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 GIMAP4Q9NUV9 329 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 RCOR3Q9P2K3 495 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-202ENST00000394820 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 PTPRFP10586 1907 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 PRSS51A0A1B0GVH4 220 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 FAM174BQ3ZCQ3 159 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 NCCRP1Q6ZVX7 275 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-202ENST00000394820 THAP5Q7Z6K1 395 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 EID3Q8N140 333 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 OR7D4Q8NG98 312 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 LZICQ8WZA0 190 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 ZHX1-C8orf76Q96EF9 292 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 FEM1CQ96JP0 617 aa13.09□□□□□ -0.31
NFKB1-202ENST00000394820 LEF1Q9UJU2 399 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-202ENST00000394820 SH3PXD2BA1X283 911 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 GABRDO14764 452 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 PRKD3O94806 890 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 CDK14O94921 469 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 APOA1P02647 267 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 COL6A1P12109 1028 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 PTGR1Q14914 329 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 AAK1Q2M2I8 961 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 PAGE3Q5JUK9 113 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 MORN1Q5T089 497 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 STEAP4Q687X5 459 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 KIAA1841Q6NSI8 718 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 SIX5Q8N196 739 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-202ENST00000394820 TRPV3Q8NET8 790 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 KCTD13Q8WZ19 329 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 SUCOQ9UBS9 1254 aaKnown RBP13.08□□□□□ -0.32
NFKB1-202ENST00000394820 SHROOM3Q8TF72 1996 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 HAPLN1P10915 354 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-202ENST00000394820 UPP1Q16831 310 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 TSTD2Q5T7W7 516 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 CLDN19Q8N6F1 224 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 PLK2Q9NYY3 685 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 SQORQ9Y6N5 450 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 FUOMA2VDF0 154 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 PENKP01210 267 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-202ENST00000394820 CCND3P30281 292 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-202ENST00000394820 CLCN2P51788 898 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 COLEC12Q5KU26 742 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 GPR180Q86V85 440 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 OR4L1Q8NH43 312 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 RSPH1Q8WYR4 309 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 TRIB2Q92519 343 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 NODALQ96S42 347 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
NFKB1-202ENST00000394820 CMTM6Q9NX76 183 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 MKS1Q9NXB0 559 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 GMIPQ9P107 970 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 ZNF451Q9Y4E5 1061 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 GMPPBQ9Y5P6 360 aa13.08□□□□□ -0.32
NFKB1-202ENST00000394820 DYTNA2CJ06 578 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 MYO1DO94832 1006 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 ACVRL1P37023 503 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 MAGEA6P43360 314 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PPP3CCP48454 512 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 INPP1P49441 399 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 ADAM17P78536 824 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 RELAQ04206 551 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PRKCZQ05513 592 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 TAB1Q15750 504 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 CTXN3Q4LDR2 81 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 NHSL2Q5HYW2 709 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms