RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PTGDR2Q9Y5Y4 395 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 DOCK1Q14185 1865 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ACOT8O14734 319 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 EPOP01588 193 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 HAPLN1P10915 354 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ARCN1P48444 511 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TUFMP49411 452 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 DEFA1P59665 94 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 DEFA3P59666 94 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SH3BP2P78314 561 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ALFQ53S48 1182 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 RAB41Q5JT25 222 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 BEND5Q7L4P6 421 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 CHERPQ8IWX8 916 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 HS6ST3Q8IZP7 471 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 RBFAQ8N0V3 343 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TMEM102Q8N9M5 508 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNF599Q96NL3 588 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 CGREF1Q99674 301 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TDRD1Q9BXT4 1180 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SCML2Q9UQR0 700 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 PDE10AQ9Y233 779 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TSC22D4Q9Y3Q8 395 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 GMPPBQ9Y5P6 360 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 GMEB1Q9Y692 573 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 U3KQV3 271 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 A0A1W2PPW3 197 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SMIM18P0DKX4 95 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 GRIA2P42262 883 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 HSPA7P48741 367 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 NRG1Q02297 640 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 GTF2H2Q13888 395 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 MAPK11Q15759 364 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 CPSF6Q16630 551 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 DEFB115Q30KQ5 88 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 PERM1Q5SV97 790 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 OTUD1Q5VV17 481 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 GTF2H2CQ6P1K8 395 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 AGMOQ6ZNB7 445 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 OR10A6Q8NH74 314 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SLC13A3Q8WWT9 602 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 BIRC7Q96CA5 298 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TM6SF2Q9BZW4 377 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 REEP1Q9H902 201 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 MIOSQ9NXC5 875 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNHIT2Q9UHR6 403 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SH3BP1Q9Y3L3 701 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TMEM247A6NEH6 219 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 LRRC14BA6NHZ5 514 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ACSL4O60488 711 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SCELO95171 688 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 CTPS1P17812 591 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ALDH7A1P49419 539 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SFSWAPQ12872 951 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 CERS6Q6ZMG9 384 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 PRR23BQ6ZRT6 265 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNF621Q6ZSS3 439 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 HIPK1Q86Z02 1210 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 S100ZQ8WXG8 99 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TMIGD2Q96BF3 282 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 FOPNLQ96NB1 174 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 PAAF1Q9BRP4 392 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 LRTM1Q9HBL6 345 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 DNAJB9Q9UBS3 223 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 SNX6Q9UNH7 406 aa11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 TDRKHQ9Y2W6 561 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-209ENST00000394804 STX16O14662 325 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 EPN2O95208 641 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 RASAL1O95294 804 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 FDXRP22570 491 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 PTGER3P43115 390 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 LSM3P62310 102 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 FKBP1BP68106 108 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 BNIP3Q12983 259 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 RGMBQ6NW40 437 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 SLC2A7Q6PXP3 512 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 CYP20A1Q6UW02 462 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 FAM151BQ6UXP7 276 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 SVOPLQ8N434 492 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 TMBIM1Q969X1 311 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 TRIM8Q9BZR9 551 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 WDR12Q9GZL7 423 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 SELENONQ9NZV5 590 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 DOLKQ9UPQ8 538 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 A0A0U1RQF3 1178 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 VILLO15195 856 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 HOXA2O43364 376 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 DLGAP3O95886 979 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 ENO2P09104 434 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 CAPN3P20807 821 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 NEK2P51955 445 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 CCL14Q16627 93 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 COQ5Q5HYK3 327 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 BLOC1S3Q6QNY0 202 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 KDELC1Q6UW63 502 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 LARP4Q71RC2 724 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 GPR180Q86V85 440 aa11.53□□□□□ -0.56
UBE2D3-209ENST00000394804 PNPLA1Q8N8W4 532 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms