RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ECHDC3Q96DC8 303 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 MOCOSQ96EN8 888 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 PTCD3Q96EY7 689 aaKnown RBP6.89□□□□□ -1.31
RTN4-205ENST00000394609 SCRN2Q96FV2 425 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 TSNARE1Q96NA8 513 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 TUBGCP5Q96RT8 1024 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 TSSK1BQ9BXA7 367 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 CPEB1Q9BZB8 566 aaKnown RBP6.89□□□□□ -1.31
RTN4-205ENST00000394609 C20orf27Q9GZN8 174 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 TRPV4Q9HBA0 871 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 NPHS2Q9NP85 383 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 ELOVL2Q9NXB9 296 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 CLDND1Q9NY35 253 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 DCTN4Q9UJW0 460 aa6.89□□□□□ -1.31
RTN4-205ENST00000394609 MYLKQ15746 1914 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 TBC1D3BA6NDS4 549 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 CAPN8A6NHC0 703 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 WASH3PC4AMC7 463 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 G3V2L1 256 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 BIRC5O15392 142 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 GSC2O15499 205 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 ZSCAN9O15535 394 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 ITM2AO43736 263 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 FKBP6O75344 327 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 ENTPD5O75356 428 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 LYPLA1O75608 230 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 CTSLP07711 333 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 LYNP07948 512 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 SBK3P0C264 359 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 KITP10721 976 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 FGF3P11487 239 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 LAMP2P13473 410 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 HLA-EP13747 358 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 BPIP17213 487 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 HOXB8P17481 243 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 UGT1A6P19224 532 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 OGNP20774 298 aaKnown RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 UGT1A1P22309 533 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 UGT1A4P22310 534 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 PSMA3P25788 255 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 BMP8BP34820 402 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 CA5AP35218 305 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 UGT1A3P35503 534 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 UGT1A5P35504 534 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 POLD2P49005 469 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 ST8SIA6P61647 398 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 TIAL1Q01085 375 aaKnown RBP eCLIP6.88□□□□□ -1.31
RTN4-205ENST00000394609 STX3Q13277 289 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 PDGFRLQ15198 375 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 TYSND1Q2T9J0 566 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 CCDC153Q494R4 210 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 KHDC1Q4VXA5 237 aaKnown RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 LIN52Q52LA3 116 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 OXLD1Q5BKU9 147 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 FOXB2Q5VYV0 432 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 LRRC66Q68CR7 880 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 GRAMD4Q6IC98 578 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 RFLNAQ6ZTI6 216 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 ACAD11Q709F0 780 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 USP45Q70EL2 814 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 NET1Q7Z628 596 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 GALNT7Q86SF2 657 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 YAF2Q8IY57 180 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 ST13P4Q8IZP2 240 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 FSTL5Q8N475 847 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 RFWD2Q8NHY2 731 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 HEXDCQ8WVB3 486 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 SGF29Q96ES7 293 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 CCDC97Q96F63 343 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 NSL1Q96IY1 281 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 ZNF641Q96N77 438 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 GPR78Q96P69 363 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 PLEKHG4BQ96PX9 1271 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 HEPHQ9BQS7 1158 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 CADM1Q9BY67 442 aaKnown RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 BRD9Q9H8M2 597 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 IL26Q9NPH9 171 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 MARCOQ9UEW3 520 aaPredicted RBP6.88□□□□□ -1.31
RTN4-205ENST00000394609 SLC8A2Q9UPR5 921 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 FAM50BQ9Y247 325 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 ANKRD6Q9Y2G4 727 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 SLC27A6Q9Y2P4 619 aa6.88□□□□□ -1.31
RTN4-205ENST00000394609 A0A0G2JND7 137 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 IQCF5A8MTL0 148 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 GAPDHSO14556 408 aaPredicted RBP6.87□□□□□ -1.31
RTN4-205ENST00000394609 KLF11O14901 512 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 ATXN7O15265 892 aaPredicted RBP6.87□□□□□ -1.31
RTN4-205ENST00000394609 SRP72O76094 671 aaKnown RBP6.87□□□□□ -1.31
RTN4-205ENST00000394609 RHOBTB1O94844 696 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 KLHL2O95198 593 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 PRAMEF1O95521 474 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 RALBP11234 206 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 IGFBP4P22692 258 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 LHCGRP22888 699 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 GDI1P31150 447 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 GJA4P35212 333 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 FCHO2Q0JRZ9 810 aa6.87□□□□□ -1.31
RTN4-205ENST00000394609 RUNX3Q13761 415 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms