RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 HS3ST4Q9Y661 456 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 LOC100506127A0A0U1RQW1 187 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 DHRS12A0PJE2 317 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SAGE2PA6NJ88 616 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SUPT3HB4E1H0 165 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 H0Y858 1186 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 H3BNH8 94 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 NR5A2O00482 541 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 NBNO60934 754 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FAM155BO75949 473 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FGF18O76093 207 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 C1RP00736 705 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 TIMP1P01033 207 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FGF1P05230 155 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 HOXB8P17481 243 aaPredicted RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 PRKAA1Q13131 559 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SUZ12Q15022 739 aaKnown RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 TTLL9Q3SXZ7 439 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 IL23RQ5VWK5 629 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FBXL22Q6P050 247 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PKN3Q6P5Z2 889 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 KLHL17Q6TDP4 642 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PGAM4Q8N0Y7 254 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SLC43A3Q8NBI5 491 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 OR9Q1Q8NGQ5 310 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 ACMSDQ8TDX5 336 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SLC44A1Q8WWI5 657 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 LPGAT1Q92604 370 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 NXNL1Q96CM4 212 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 ZNF486Q96H40 463 aaPredicted RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 CLPBQ9H078 707 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PIF1Q9H611 641 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.64□□□□□ -1.51
RFFL-202ENST00000394597 CD274Q9NZQ7 290 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 NOX1Q9Y5S8 564 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 A6NL46 340 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PIGNO95427 931 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 HNRNPFP52597 415 aaKnown RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 PITX1P78337 314 aaPredicted RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 CSHL1Q14406 222 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 RBBP7Q16576 425 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PKDCCQ504Y2 493 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 TTC23Q5W5X9 447 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PM20D1Q6GTS8 502 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 CES5AQ6NT32 575 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 HDDC2Q7Z4H3 204 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 RELL1Q8IUW5 271 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 ALDH16A1Q8IZ83 802 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 GLIS1Q8NBF1 620 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 OVCA2Q8WZ82 227 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 CENPIQ92674 756 aaPredicted RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 CASD1Q96PB1 797 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 CDH19Q9H159 772 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SP140LQ9H930 580 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SLC28A3Q9HAS3 691 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SPAG4Q9NPE6 437 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 GKN1Q9NS71 199 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 USE1Q9NZ43 259 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PTBP2Q9UKA9 531 aaKnown RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 PCDHGA10Q9Y5H3 936 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PSME4Q14997 1843 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 CROCCQ5TZA2 2017 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 TTC34A8MYJ7 566 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 I3L521 148 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 ADAM23O75077 832 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 CPNE3O75131 537 aaKnown RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 HSMCR30P0CW71 290 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 OR2B6P58173 313 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FAM189BP81408 668 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SLC18A2Q05940 514 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 RAB39AQ14964 217 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SIX1Q15475 284 aaPredicted RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 CLPPQ16740 277 aaPredicted RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 PHKG1Q16816 387 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 RTP2Q5QGT7 225 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 ADGRF1Q5T601 910 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 ZNF697Q5TEC3 545 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PRR23BQ6ZRT6 265 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 BEND5Q7L4P6 421 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 EFL1Q7Z2Z2 1120 aaKnown RBP5.64□□□□□ -1.51
RFFL-202ENST00000394597 RAB43Q86YS6 212 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 C10orf107Q8IVU9 208 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SVOPQ8N4V2 548 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 METTL25Q8N6Q8 603 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 OR7D4Q8NG98 312 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 OR8H1Q8NGG4 311 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SPATA22Q8NHS9 363 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 CHPT1Q8WUD6 406 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 PSMG2Q969U7 264 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 SIPA1Q96FS4 1042 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FAR2Q96K12 515 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 C1orf74Q96LT6 269 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FOPNLQ96NB1 174 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 HGH1Q9BTY7 390 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 OR2B2Q9GZK3 357 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 RMND5AQ9H871 391 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FAM8A1Q9UBU6 413 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 TPRKBQ9Y3C4 175 aa5.64□□□□□ -1.51
RFFL-202ENST00000394597 FAM95CA0A1B0GW59 222 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms