RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 C1QTNF8P60827 252 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 RGS1Q08116 209 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 BAK1Q16611 211 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 LRRC38Q5VT99 294 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 LETMD1Q6P1Q0 360 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 LRFN4Q6PJG9 635 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 FRS2Q8WU20 508 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TMCO6Q96DC7 493 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 KLHL15Q96M94 604 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TMEM8AQ9HCN3 771 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 IL20Q9NYY1 176 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 CITO14578 2027 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 BPTFQ12830 3046 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 A0A1W2PP18 115 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TTC24A2A3L6 582 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TCP10L2B9ZVM9 353 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 F8W810 466 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 SLC16A4O15374 487 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 YKT6O15498 198 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 ANGPTL1O95841 491 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 FTH1P02794 183 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 HSMCR30P0CW71 290 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 CNTFP26441 200 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 HOXA13P31271 388 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PTPN7P35236 360 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 LIPAP38571 399 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 GLUD2P49448 558 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 SLC25A11Q02978 314 aaKnown RBP12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PCDH1Q08174 1060 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 RIN1Q13671 783 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 LAIR1Q6GTX8 287 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 NAPEPLDQ6IQ20 393 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 CCDC36Q8IYA8 594 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 KDM1BQ8NB78 822 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 AGAP2Q99490 1192 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TAS2R7Q9NYW3 318 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PAK5Q9P286 719 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 LINC00862A6NCI5 91 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PLATP00750 562 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 FCGR1AP12314 374 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 NPR3P17342 541 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 CA5AP35218 305 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TGFBR2P37173 567 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 CSKP41240 450 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 GABARAPL2P60520 117 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 UBXN2AP68543 259 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PRKCDQ05655 676 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 OLIG2Q13516 323 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 ZNF273Q14593 569 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PTPRCAPQ14761 206 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PSMD5Q16401 504 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 KIF19Q2TAC6 998 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PRSS36Q5K4E3 855 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 CCNJQ5T5M9 372 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 PHF13Q86YI8 300 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 P3H2Q8IVL5 708 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 KIAA1958Q8N8K9 716 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 ANKRD52Q8NB46 1076 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 NETO2Q8NC67 525 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 SPPL2BQ8TCT7 592 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 VPS39Q96JC1 886 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 LINC00052Q96N35 136 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 MAP10Q9P2G4 905 aa12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 SEPT9Q9UHD8 586 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-203ENST00000394573 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 HS6ST1O60243 411 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 PCSK2P16519 638 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 TSPAN8P19075 237 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 MGAT1P26572 445 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 GRK5P34947 590 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 SCRN3Q0VDG4 424 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 DDR2Q16832 855 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 LCN8Q6JVE9 175 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 PELI3Q8N2H9 469 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 GPR78Q96P69 363 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 GFM1Q96RP9 751 aaKnown RBP12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 SLC25A23Q9BV35 468 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 ZNF416Q9BWM5 594 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 LRRC4Q9HBW1 653 aa12.4□□□□□ -0.42
SLC28A1-203ENST00000394573 TMEM150BA6NC51 233 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 NEMP2A6NFY4 417 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 DDX39AO00148 427 aaKnown RBP12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 GPC1P35052 558 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 BCAT1P54687 386 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 ISL1P61371 349 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 GSTO1P78417 241 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 ALFQ53S48 1182 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 LIPMQ5VYY2 423 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 TTC23Q5W5X9 447 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 ALG1LQ6GMV1 187 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 FSTL4Q6MZW2 842 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 FAM45BPQ6NSW5 357 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 CNSTQ6PJW8 725 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 GALNT5Q7Z7M9 940 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms