RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 LARP4Q71RC2 724 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 SLCO6A1Q86UG4 719 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 PROSER1Q86XN7 944 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 ZNF513Q8N8E2 541 aaPredicted RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 UTP15Q8TED0 518 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 SLC47A1Q96FL8 570 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 AARSD1Q9BTE6 412 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 TFB2MQ9H5Q4 396 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 DDX28Q9NUL7 540 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 LMCD1Q9NZU5 365 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 NBNO60934 754 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 KRT6AP02538 564 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 KRT6BP04259 564 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 AQP1P29972 269 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 KRT6CP48668 564 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 USP50Q70EL3 339 aaPredicted RBP15.96■□□□□ 0.15
PCDH1-203ENST00000394536 RASAL3Q86YV0 1011 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 ZNF540Q8NDQ6 660 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 GPR78Q96P69 363 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 TSPAN18Q96SJ8 248 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 FAM126AQ9BYI3 521 aaPredicted RBP15.96■□□□□ 0.15
PCDH1-203ENST00000394536 CCSER2Q9H7U1 834 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 HMG20AQ9NP66 347 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 TMEM181Q9P2C4 612 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 LOC100506127A0A0U1RQW1 187 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 KPNA4O00629 521 aaPredicted RBP15.96■□□□□ 0.15
PCDH1-203ENST00000394536 PENKP01210 267 aaPredicted RBP15.96■□□□□ 0.15
PCDH1-203ENST00000394536 TACR2P21452 398 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 DET1Q7L5Y6 550 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 SLC44A2Q8IWA5 706 aaPredicted RBP15.96■□□□□ 0.15
PCDH1-203ENST00000394536 OR52B6Q8NGF0 335 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 SPPL2AQ8TCT8 520 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 ELMO1Q92556 727 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 GLT1D1Q96MS3 346 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 FEM1AQ9BSK4 669 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 CIPCQ9C0C6 399 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 NAA50Q9GZZ1 169 aaKnown RBP15.96■□□□□ 0.15
PCDH1-203ENST00000394536 ABCB10Q9NRK6 738 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 TAF1LQ8IZX4 1826 aa15.96■□□□□ 0.15
PCDH1-203ENST00000394536 PRRG1O14668 218 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 GJA5P36382 358 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 ERVK-8P63133 956 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 IL10RBQ08334 325 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 UPP1Q16831 310 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 HID1Q8IV36 788 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 LINC01465Q8N7H1 131 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 PLEKHA8Q96JA3 519 aa15.96■□□□□ 0.14
PCDH1-203ENST00000394536 GPATCH1Q9BRR8 931 aaKnown RBP15.96■□□□□ 0.14
PCDH1-203ENST00000394536 TNPO3Q9Y5L0 923 aaKnown RBP15.96■□□□□ 0.14
PCDH1-203ENST00000394536 COL4A5P29400 1685 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 A0A1W2PQ67 120 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 KERAO60938 352 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PRKD3O94806 890 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 OTCP00480 354 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 C8BP07358 591 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 MBL2P11226 248 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PPP3CCP48454 512 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 IDH2P48735 452 aaKnown RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 CDKN1CP49918 316 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 SEMA3BQ13214 749 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TTLL9Q3SXZ7 439 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 ZCCHC8Q6NZY4 707 aaKnown RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 KIAA2013Q8IYS2 634 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PSMA8Q8TAA3 256 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TFAP2CQ92754 450 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 FEM1CQ96JP0 617 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 AMBNQ9NP70 447 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 CD320Q9NPF0 282 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PCDH12Q9NPG4 1184 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF490Q9ULM2 529 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PDE10AQ9Y233 779 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PRMT5O14744 637 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 GPX3P22352 226 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 STC1P52823 247 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TXNL4AP83876 142 aaKnown RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 DAG1Q14118 895 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PTGR1Q14914 329 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PARP15Q460N3 678 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 C6orf136Q5SQH8 315 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TXNDC11Q6PKC3 985 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 CYP20A1Q6UW02 462 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 FUNDC1Q8IVP5 155 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 OR13J1Q8NGT2 312 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 ISL2Q96A47 359 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 PPP3R2Q96LZ3 170 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 RMND5AQ9H871 391 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TREX1Q9NSU2 369 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TLR6Q9Y2C9 796 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 ZFP37Q9Y6Q3 630 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 MCM3APO60318 1980 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TMEM247A6NEH6 219 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 BMP2P12643 396 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 EPB42P16452 691 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 S100A5P33763 92 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 SYVN1Q86TM6 617 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 ZUFSPQ96AP4 578 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 AURKBQ96GD4 344 aaPredicted RBP15.95■□□□□ 0.14
PCDH1-203ENST00000394536 CGREF1Q99674 301 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms