RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 TIE1P35590 1138 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 BMPR1AP36894 532 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 IDH3AP50213 366 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 SLC18A1P54219 525 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 SLC18A2Q05940 514 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 CSTF3Q12996 717 aaKnown RBP10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 NRF1Q16656 503 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 PAQR9Q6ZVX9 377 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 TAS1R1Q7RTX1 841 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 ZDHHC13Q8IUH4 622 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 FAM13CQ8NE31 585 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 DNAJC28Q9NX36 388 aa10.54□□□□□ -0.72
MTHFD2-201ENST00000394053 STK19P49842 368 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 SPIDRQ14159 915 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 VPS26BQ4G0F5 336 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 SULT1C3Q6IMI6 304 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 CYP4Z1Q86W10 505 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 CILP2Q8IUL8 1156 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 LINC01465Q8N7H1 131 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 PYCR2Q96C36 320 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 PGAP3Q96FM1 320 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 MRGPRX2Q96LB1 330 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 ZNF317Q96PQ6 595 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 TFB2MQ9H5Q4 396 aaKnown RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 SHANK3Q9BYB0 1731 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 PIP5K1BO14986 540 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 ITM2AO43736 263 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 DLX3O60479 287 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 NPHS1O60500 1241 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 RECQL5O94762 991 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 UROSP10746 265 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 RAB30Q15771 203 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 GALNT13Q8IUC8 556 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 EID3Q8N140 333 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 PTCD3Q96EY7 689 aaKnown RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 FCRL3Q96P31 734 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 CASD1Q96PB1 797 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 RTKNQ9BST9 563 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 EXOSC4Q9NPD3 245 aaKnown RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 IL36AQ9UHA7 158 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 SLCO3A1Q9UIG8 710 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 PRPF19Q9UMS4 504 aaKnown RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 NENFQ9UMX5 172 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 C15orf41Q9Y2V0 281 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 TMEM189-UBE2V1I3L0A0 370 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 FFAR2O15552 330 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 PFDN1O60925 122 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 DLDP09622 509 aaKnown RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 HLA-EP13747 358 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 IL4RP24394 825 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 STC1P52823 247 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 SLC16A1P53985 500 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 GRSF1Q12849 480 aaKnown RBP eCLIP10.53□□□□□ -0.721e-7■□□□□ 9
MTHFD2-201ENST00000394053 MPP2Q14168 576 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 LRRC66Q68CR7 880 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 FAM43BQ6ZT52 329 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 BEND5Q7L4P6 421 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 HPS6Q86YV9 775 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 ZNF513Q8N8E2 541 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 ZNF184Q99676 751 aaPredicted RBP10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 ZDHHC3Q9NYG2 299 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 MAPRE3Q9UPY8 281 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 SMCHD1A6NHR9 2005 aa10.53□□□□□ -0.72
MTHFD2-201ENST00000394053 CLOCKO15516 846 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 TM7SF2O76062 418 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 BMP10O95393 424 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 CTSAP10619 480 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 HOXD8P13378 290 aaPredicted RBP10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 PTDSS1P48651 473 aaKnown RBP10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 SKP1P63208 163 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 LMAN2Q12907 356 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 EIF2B5Q13144 721 aaKnown RBP10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 PEX6Q13608 980 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 ZC3H12BQ5HYM0 836 aaKnown RBP10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 DHDDSQ86SQ9 333 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 CPSF7Q8N684 471 aaKnown RBP10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 CNTD1Q8N815 330 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 IL12RB2Q99665 862 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 SOHLH2Q9NX45 425 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 PHIPQ8WWQ0 1821 aa10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 COL5A3P25940 1745 aaPredicted RBP10.52□□□□□ -0.72
MTHFD2-201ENST00000394053 GLDCP23378 1020 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 NTSP30990 170 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 TLX1P31314 330 aaPredicted RBP10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 LDLRAP1Q5SW96 308 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 TMEM198Q66K66 360 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 TRNP1Q6NT89 227 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 ZNF549Q6P9A3 640 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 Q6ZVL8 140 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 SPATA19Q7Z5L4 167 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 MICU2Q8IYU8 434 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 DSELQ8IZU8 1212 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 C10orf53Q8N6V4 93 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 UTP15Q8TED0 518 aaKnown RBP10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 TOP1MTQ969P6 601 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 RAD51AP1Q96B01 352 aa10.52□□□□□ -0.73
MTHFD2-201ENST00000394053 TOX2Q96NM4 488 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms