RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 C17orf77Q96MU5 243 aa3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 OR2A14Q96R47 310 aa3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 F2RL3Q96RI0 385 aa3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 SMC6Q96SB8 1091 aa3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 GFI1Q99684 422 aa3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 SH2D4AQ9H788 454 aa3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 RCC2Q9P258 522 aaKnown RBP3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 CORO1CQ9ULV4 474 aaPredicted RBP3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 YIPF1Q9Y548 306 aa3.42□□□□□ -1.86
SNORA40.3-201ENST00000390964 MYO1GB0I1T2 1018 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 H3BQ06 376 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 PLPP2O43688 288 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 HS6ST1O60243 411 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 PCDH7O60245 1069 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 USO1O60763 962 aaKnown RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ZNF217O75362 1048 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 OR2C1O95371 312 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 TUBBP07437 444 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 RARGP13631 454 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 SELLP14151 372 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 PPARGP37231 505 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 MSH2P43246 934 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 TUBB4BP68371 445 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 SETQ01105 290 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 KRT32Q14532 448 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 CRYMQ14894 314 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ASTE1Q2TB18 679 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 KRTAP27-1Q3LI81 207 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ASPRV1Q53RT3 343 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 WDR38Q5JTN6 314 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 RARS2Q5T160 578 aaKnown RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 GKAP1Q5VSY0 366 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 SFMBT2Q5VUG0 894 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 HAUS3Q68CZ6 603 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 FAM109BQ6ICB4 259 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 CEACAM20Q6UY09 585 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 CFAP77Q6ZQR2 320 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 IKBIPQ70UQ0 350 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 LONP2Q86WA8 852 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 GSDMBQ8TAX9 411 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 TM9SF4Q92544 642 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 USP6NLQ92738 828 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 WBP2Q969T9 261 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ELMOD3Q96FG2 381 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 PGAM5Q96HS1 289 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ZNF354BQ96LW1 612 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 CMTM3Q96MX0 182 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 NEUROD6Q96NK8 337 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 RBM4Q9BWF3 364 aaKnown RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 C1QTNF1Q9BXJ1 281 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ITPAQ9BY32 194 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ZNF696Q9H7X3 374 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 KAT14Q9H8E8 782 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ZBTB20Q9HC78 741 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 TRPC7Q9HCX4 862 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 SETD4Q9NVD3 440 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 SESN1Q9Y6P5 492 aa3.41□□□□□ -1.86
SNORA40.3-201ENST00000390964 FRMD3A2A2Y4 597 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 PI4KAP2A4QPH2 592 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 TMEM8BA6NDV4 472 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 PGPEP1LA6NFU8 196 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 SMIM1B2RUZ4 78 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 NTN3O00634 580 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 SRPRAP08240 638 aaKnown RBP3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 ACADMP11310 421 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 SPOCK1Q08629 439 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 GAGE2BQ13066 116 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 DUOXA1Q1HG43 343 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 TMEM30BQ3MIR4 351 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 GAGE2EQ4V326 116 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 TECRLQ5HYJ1 363 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 GAGE2AQ6NT46 116 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZNF534Q76KX8 674 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 CEP97Q8IW35 865 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 WDSUB1Q8N9V3 476 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 SCFD2Q8WU76 684 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 SMPDL3BQ92485 455 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 LGALS12Q96DT0 336 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 OXNAD1Q96HP4 312 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 DACH2Q96NX9 599 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 KRT84Q9NSB2 600 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 GAGE2DQ9UEU5 116 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 ACAD8Q9UKU7 415 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 NENFQ9UMX5 172 aa3.4□□□□□ -1.87
SNORA40.3-201ENST00000390964 OR2M5A3KFT3 312 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 BLOC1S5-TXNDC5H3BN57 136 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 J3QR06 171 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZBTB43O43298 467 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 BMP10O95393 424 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 CAVIN2O95810 425 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 CGAP01215 116 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 LIPFP07098 398 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 CAMPP49913 170 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 NR0B1P51843 470 aaKnown RBP3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 DCAF7P61962 342 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 MBTD1Q05BQ5 628 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 IKQ13123 557 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 PPIGQ13427 754 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 MEP1AQ16819 746 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms