RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 TCEA3O75764 348 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 PGRP06401 933 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 CYP4F8P98187 520 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 COL9A3Q14050 684 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 ADGRE1Q14246 886 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 TOMM20Q15388 145 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 POM121L1PQ3SYA9 428 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 CPTPQ5TA50 214 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 COLGALT2Q8IYK4 626 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 PDE10AQ9Y233 779 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 OAS3Q9Y6K5 1087 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 AGPSO00116 658 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 TP73O15350 636 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 NOS1APO75052 506 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 CXCL14O95715 111 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 SLC10A3P09131 477 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 MNDAP41218 407 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 WNT3AP56704 352 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 NRG1Q02297 640 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 PTGES3Q15185 160 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 RNASEH2BQ5TBB1 312 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 CNSTQ6PJW8 725 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 BTN2A1Q7KYR7 527 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 RALGPS2Q86X27 583 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 TWIST2Q8WVJ9 160 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 KBTBD7Q8WVZ9 684 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 ROPN1LQ96C74 230 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 TMCO6Q96DC7 493 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 LMAN2LQ9H0V9 348 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 KCNE2Q9Y6J6 123 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 SLC30A4O14863 429 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 GNPDA1P46926 289 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 ARHGDIBP52566 201 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 GRM3Q14832 879 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 KCTD19Q17RG1 926 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 CERCAMQ5T4B2 595 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 DENND1CQ8IV53 801 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 ZZZ3Q8IYH5 903 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 RBFAQ8N0V3 343 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 FAM98AQ8NCA5 519 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 CPT1BQ92523 772 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 LENG8Q96PV6 779 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 ALG2Q9H553 416 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 MAT2BQ9NZL9 334 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 TBC1D14Q9P2M4 693 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 WASF2Q9Y6W5 498 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 MPZL2O60487 215 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 SULT2A1Q06520 285 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 SLC25A52Q3SY17 297 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 RNASE12Q5GAN4 147 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 HECTD2Q5U5R9 776 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 HGSNATQ68CP4 663 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 FAM171BQ6P995 826 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 C12orf50Q8NA57 414 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 SLC28A3Q9HAS3 691 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 NPEPPSL1A6NEC2 478 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 VPS26BQ4G0F5 336 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 NKD2Q969F2 451 aaPredicted RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 MRPL45Q9BRJ2 306 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 GPATCH1Q9BRR8 931 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 KAT8Q9H7Z6 458 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 BRD9Q9H8M2 597 aa13.86□□□□□ -0.19
SNPH-201ENST00000381867 INTS7Q9NVH2 962 aaKnown RBP13.86□□□□□ -0.19
SNPH-201ENST00000381867 TBL1XO60907 577 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 MC4RP32245 332 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 HNF4AP41235 474 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 TPTEP56180 551 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 VWA5B1Q5TIE3 1220 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 JOSD2Q8TAC2 188 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 C17orf50Q8WW18 174 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 C11orf49Q9H6J7 331 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 ELL3Q9HB65 397 aaPredicted RBP13.85□□□□□ -0.19
SNPH-201ENST00000381867 TNFRSF11BO00300 401 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 SCELO95171 688 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 TRBC1P01850 177 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 PFKMP08237 780 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 ATF6P18850 670 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 MAXP61244 160 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 ALG11Q2TAA5 492 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 CEP68Q76N32 757 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
SNPH-201ENST00000381867 LRTM1Q9HBL6 345 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 PIRTP0C851 137 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 OGNP20774 298 aaKnown RBP13.85□□□□□ -0.19
SNPH-201ENST00000381867 PPP1R26Q5T8A7 1209 aaPredicted RBP13.85□□□□□ -0.19
SNPH-201ENST00000381867 IRF2BP1Q8IU81 584 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 LRRC20Q8TCA0 184 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 GPSM3Q9Y4H4 160 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 ACSL4O60488 711 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 S100GP29377 79 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 AP3S2P59780 193 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 E2F2Q14209 437 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 RFTN2Q52LD8 501 aaPredicted RBP13.85□□□□□ -0.19
SNPH-201ENST00000381867 DAW1Q8N136 415 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms