RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ZNF711Q9Y462 761 aa15.71■□□□□ 0.11
VCX3A-201ENST00000381089 A0A1B0GTH6 734 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 OR52A4PA6NMU1 304 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 GOLGA6L19H0YKK7 550 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 KIF1CO43896 1103 aaKnown RBP15.7■□□□□ 0.1
VCX3A-201ENST00000381089 KCNJ13O60928 360 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 SERPINC1P01008 464 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 SERPING1P05155 500 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 IFI35P80217 286 aaPredicted RBP15.7■□□□□ 0.1
VCX3A-201ENST00000381089 PPIDQ08752 370 aaKnown RBP15.7■□□□□ 0.1
VCX3A-201ENST00000381089 TMC3Q7Z5M5 1100 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 TMEM135Q86UB9 458 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 NT5DC3Q86UY8 548 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 TRAPPC5Q8IUR0 188 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 GDAP1Q8TB36 358 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 BRSK1Q8TDC3 778 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 SYN2Q92777 582 aaPredicted RBP15.7■□□□□ 0.1
VCX3A-201ENST00000381089 FAF2Q96CS3 445 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 EID2BQ96D98 161 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 SLC25A23Q9BV35 468 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 DTLQ9NZJ0 730 aa15.7■□□□□ 0.1
VCX3A-201ENST00000381089 G3BP2Q9UN86 482 aaKnown RBP15.7■□□□□ 0.1
VCX3A-201ENST00000381089 SPENQ96T58 3664 aaKnown RBP15.69■□□□□ 0.1
VCX3A-201ENST00000381089 MTX2O75431 263 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 PIRTP0C851 137 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 BRAFP15056 766 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 PTPN4P29074 926 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 DRG2P55039 364 aaKnown RBP15.69■□□□□ 0.1
VCX3A-201ENST00000381089 CDK18Q07002 472 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 AP1B1Q10567 949 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 PCSK7Q16549 785 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 UGT8Q16880 541 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 ATP13A4Q4VNC1 1196 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 CAPRIN2Q6IMN6 1127 aaKnown RBP15.69■□□□□ 0.1
VCX3A-201ENST00000381089 ALKBH5Q6P6C2 394 aaKnown RBP15.69■□□□□ 0.1
VCX3A-201ENST00000381089 SYVN1Q86TM6 617 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 KMT5CQ86Y97 462 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.69■□□□□ 0.1
VCX3A-201ENST00000381089 LRRN4Q8WUT4 740 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 VPS35Q96QK1 796 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 ZCCHC2Q9C0B9 1178 aaKnown RBP15.69■□□□□ 0.1
VCX3A-201ENST00000381089 ACSS2Q9NR19 701 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 CTTNBP2NLQ9P2B4 639 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 TRIM10Q9UDY6 481 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 PLEKHB1Q9UF11 243 aaPredicted RBP15.69■□□□□ 0.1
VCX3A-201ENST00000381089 NOTCH2Q04721 2471 aa15.69■□□□□ 0.1
VCX3A-201ENST00000381089 ICE1Q9Y2F5 2266 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 A0A1W2PQJ5 194 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 DNAJB5O75953 348 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 PROSCO94903 275 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 BPIP17213 487 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 GNLYP22749 145 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 FECHP22830 423 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
VCX3A-201ENST00000381089 UQCRFS1P47985 274 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 TPM4P67936 248 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 TMEM115Q12893 351 aaPredicted RBP15.68■□□□□ 0.1
VCX3A-201ENST00000381089 ZBTB17Q13105 803 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 PLCL1Q15111 1095 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 HGSNATQ68CP4 663 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 PWWP2BQ6NUJ5 590 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 ZNF547Q8IVP9 402 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 PQLC3Q8N755 202 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 SSC4DQ8WTU2 575 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 IMP4Q96G21 291 aaKnown RBP15.68■□□□□ 0.1
VCX3A-201ENST00000381089 SLC41A2Q96JW4 573 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 TRIB3Q96RU7 358 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 CD180Q99467 661 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 MAK16Q9BXY0 300 aaKnown RBP15.68■□□□□ 0.1
VCX3A-201ENST00000381089 UVRAGQ9P2Y5 699 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 PCDHGA9Q9Y5G4 932 aaKnown RBP15.68■□□□□ 0.1
VCX3A-201ENST00000381089 HEY1Q9Y5J3 304 aa15.68■□□□□ 0.1
VCX3A-201ENST00000381089 A0A087X0T9 212 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 IGHV5-51A0A0C4DH38 117 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 UBA6A0AVT1 1052 aaPredicted RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 PPP1R12AO14974 1030 aaPredicted RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 CPNE3O75131 537 aaKnown RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 FAM228BP0C875 321 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 SLC10A2Q12908 348 aaPredicted RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 PDK1Q15118 436 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 SLC14A2Q15849 920 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 DNTTIP2Q5QJE6 756 aaKnown RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 ZDHHC20Q5W0Z9 365 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 AMZ2Q86W34 360 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 GAS2L3Q86XJ1 694 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 CNTD1Q8N815 330 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 IQCDQ96DY2 449 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 ZNF514Q96K75 400 aaPredicted RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 NAP1L5Q96NT1 182 aaPredicted RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 AGAP3Q96P47 875 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 RNF157Q96PX1 679 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 ANP32EQ9BTT0 268 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 TRIM55Q9BYV6 548 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 SLC25A51Q9H1U9 297 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 FGF21Q9NSA1 209 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 CUEDC1Q9NWM3 386 aaPredicted RBP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.67■□□□□ 0.1
VCX3A-201ENST00000381089 SEMA5BQ9P283 1151 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 PCDHGB7Q9Y5F8 929 aa15.67■□□□□ 0.1
VCX3A-201ENST00000381089 UTP20O75691 2785 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms