RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 GLYATL1P3A0A0U1RQE8 302 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 LINC00032P0C843 101 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 DGKAP23743 735 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 CD70P32970 193 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 HNF1BP35680 557 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 SFSWAPQ12872 951 aaKnown RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 CRY1Q16526 586 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 MAP7D1Q3KQU3 841 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 RARS2Q5T160 578 aaKnown RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 LPCAT4Q643R3 524 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 PRMT9Q6P2P2 845 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 PHYKPLQ8IUZ5 450 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 RNF148Q8N7C7 305 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 KCNA7Q96RP8 456 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 LYSMD1Q96S90 227 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 CORO1BQ9BR76 489 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 CIPCQ9C0C6 399 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 TUBB1Q9H4B7 451 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 SDR39U1Q9NRG7 319 aaPredicted RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 RIC8BQ9NVN3 520 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 GALNT8Q9NY28 637 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 ATXN10Q9UBB4 475 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 A0A0U1RQS6 177 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 E7ENX8 843 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 ACOT8O14734 319 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 RAD51BO15315 384 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 CLDN7O95471 211 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 SPAM1P38567 509 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 MRPS22P82650 360 aaKnown RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 MS4A2Q01362 244 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 LRRC26Q2I0M4 334 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 COQ5Q5HYK3 327 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 GPRIN3Q6ZVF9 776 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 MYO1HQ8N1T3 1032 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 ZNF557Q8N988 423 aaPredicted RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 ZNF382Q96SR6 550 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 PREBQ9HCU5 417 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 CRLS1Q9UJA2 301 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 DENND4CQ5VZ89 1909 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 TRBV5-4A0A0C4DH59 114 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 TRIM43BA6NCK2 446 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 E2F3O00716 465 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 ANGPT2O15123 496 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 TPD52L2O43399 206 aaKnown RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 ACRP10323 421 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 HSPA8P11142 646 aaKnown RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 ARSAP15289 507 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 ITGB8P26012 769 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 DDX6P26196 483 aaKnown RBP eCLIP12.47□□□□□ -0.41
VPS16-202ENST00000380445 ACRV1P26436 265 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 PEX2P28328 305 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 MRPL19P49406 292 aaKnown RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 AGTR2P50052 363 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 HK3P52790 923 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 PCBP2Q15366 365 aaKnown RBP eCLIP12.47□□□□□ -0.412e-9■■■■□ 21.4
VPS16-202ENST00000380445 PITRM1Q5JRX3 1037 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 SYVN1Q86TM6 617 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 SPATA24Q86W54 205 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 FUNDC1Q8IVP5 155 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 ICA1LQ8NDH6 482 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 OR9I1Q8NGQ6 314 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 TRIM43Q96BQ3 446 aaPredicted RBP12.47□□□□□ -0.41
VPS16-202ENST00000380445 HTATIP2Q9BUP3 242 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 SLC46A2Q9BY10 475 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 TNKS2Q9H2K2 1166 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 IL26Q9NPH9 171 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 GID8Q9NWU2 228 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 SLC25A13Q9UJS0 675 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 HS3ST2Q9Y278 367 aa12.47□□□□□ -0.41
VPS16-202ENST00000380445 A0A1W2PQ67 120 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 IQCF5A8MTL0 148 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 TRIM24O15164 1050 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 GRM6O15303 877 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 GLUD1P00367 558 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 TCN1P20061 433 aaPredicted RBP12.46□□□□□ -0.41
VPS16-202ENST00000380445 GRB7Q14451 532 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 CDKN3Q16667 212 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 OGFRL1Q5TC84 451 aaPredicted RBP12.46□□□□□ -0.41
VPS16-202ENST00000380445 TPRG1Q6ZUI0 275 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 USP45Q70EL2 814 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 RTL10Q7L3V2 364 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 OTOP2Q7RTS6 562 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 ASIC4Q96FT7 647 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 PAWRQ96IZ0 340 aaKnown RBP12.46□□□□□ -0.41
VPS16-202ENST00000380445 TMEM45AQ9NWC5 275 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 CLEC4EQ9ULY5 219 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 BTRCQ9Y297 605 aa12.46□□□□□ -0.41
VPS16-202ENST00000380445 GAPDHSO14556 408 aaPredicted RBP12.46□□□□□ -0.42
VPS16-202ENST00000380445 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.42
VPS16-202ENST00000380445 PRR35P0CG20 571 aa12.46□□□□□ -0.42
VPS16-202ENST00000380445 SRCP12931 536 aa12.46□□□□□ -0.42
VPS16-202ENST00000380445 MSX2P35548 267 aaPredicted RBP12.46□□□□□ -0.42
VPS16-202ENST00000380445 MED21Q13503 144 aa12.46□□□□□ -0.42
VPS16-202ENST00000380445 MYLK3Q32MK0 819 aa12.46□□□□□ -0.42
VPS16-202ENST00000380445 EML3Q32P44 896 aa12.46□□□□□ -0.42
VPS16-202ENST00000380445 GRAMD1BQ3KR37 738 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms