RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 MCMBPQ9BTE3 642 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 TUBB1Q9H4B7 451 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 TREX1Q9NSU2 369 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 HACD3Q9P035 362 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 AASSQ9UDR5 926 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 A0A0D9SEW6 157 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 NPEPPSL1A6NEC2 478 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 TRIM64BA6NI03 449 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ARPC2O15144 300 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 OR1I1O60431 355 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 S1PR4O95977 384 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 OR1E1P30953 314 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ZNF235Q14590 738 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 GPR162Q16538 588 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ZNF549Q6P9A3 640 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 LARP4Q71RC2 724 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 RAB44Q7Z6P3 723 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 CLYBLQ8N0X4 340 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 KLHDC9Q8NEP7 349 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ADAM2Q99965 735 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 SUCOQ9UBS9 1254 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 IKZF3Q9UKT9 509 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ZSCAN5BA6NJL1 495 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 FFAR3O14843 346 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 MUSKO15146 869 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 TRIM24O15164 1050 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 AXIN1O15169 862 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 CD3EAPO15446 510 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 GPR42O15529 346 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 IMPDH1P20839 514 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 SERPINB1P30740 379 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 OR1G1P47890 313 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 TRPC1P48995 793 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 RACK1P63244 317 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 LRIT3Q3SXY7 679 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 SLC36A3Q495N2 470 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 KIAA0930Q6ICG6 404 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 PLEKHG7Q6ZR37 379 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 GALNT13Q8IUC8 556 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ZCCHC7Q8N3Z6 543 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 FBXO30Q8TB52 745 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 KCTD14Q9BQ13 255 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 MEAF6Q9HAF1 191 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 NEK6Q9HC98 313 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 GMIPQ9P107 970 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 MTRRQ9UBK8 725 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ASB1Q9Y576 335 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 PCM1Q15154 2024 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC12A8A0AV02 714 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 PTGES3LE9PB15 166 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 EIF2S1P05198 315 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 ALOX5P09917 674 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 ODC1P11926 461 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 LAPTM4AQ15012 233 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 FSCN1Q16658 493 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 SIGIRRQ6IA17 410 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 BNIPLQ7Z465 357 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 SLCO6A1Q86UG4 719 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 CAMK1DQ8IU85 385 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 CLEC4FQ8N1N0 589 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 FBXO39Q8N4B4 442 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 FNDC5Q8NAU1 212 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 OR7D4Q8NG98 312 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 CLHC1Q8NHS4 586 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 ITCHQ96J02 903 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 GPR21Q99679 349 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 PTPN18Q99952 460 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 ING2Q9H160 280 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 POLG2Q9UHN1 485 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 PCDHGC4Q9Y5F7 938 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 RAD54BQ9Y620 910 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 NT5C1B-RDH14C9J2C7 533 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 BNIP3LO60238 219 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 NOBOXO60393 691 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 NIPSNAP2O75323 286 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 BCAS1O75363 584 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 ADRA1AP35348 466 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 HCAR3P49019 387 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 GSK3BP49841 420 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 SEPHS1P49903 392 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 TMBIM6P55061 237 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 TBX4P57082 545 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 LIPEQ05469 1076 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 UGT3A2Q3SY77 523 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 PYCR3Q53H96 274 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 TBPL2Q6SJ96 375 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 CRTC3Q6UUV7 619 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 ZNF598Q86UK7 904 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 RTL3Q8N8U3 475 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 GIPC2Q8TF65 315 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 MTFMTQ96DP5 389 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 SEPT5Q99719 369 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 ITM2CQ9NQX7 267 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 CD274Q9NZQ7 290 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
PRPF40B-202ENST00000380281 LOC105371267A0A1B0GV96 52 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms