RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CCDC59Q9P031 241 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 STOML2Q9UJZ1 356 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MFHAS1Q9Y4C4 1052 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 POLR2AP24928 1970 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 NEMP1O14524 444 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 SYN3O14994 580 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 NRP2O60462 931 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PLIN3O60664 434 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ADORA3P0DMS8 318 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TGM2P21980 687 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MAOBP27338 520 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 GNPDA1P46926 289 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 AANATQ16613 207 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF792Q3KQV3 632 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 IQCCQ4KMZ1 466 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 LAMTOR1Q6IAA8 161 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MPZL3Q6UWV2 235 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 EFL1Q7Z2Z2 1120 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 KRT77Q7Z794 578 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 GPAT4Q86UL3 456 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 RASGRP3Q8IV61 690 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 AGR3Q8TD06 166 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 APBB2Q92870 758 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 GAD1Q99259 594 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ASPSCR1Q9BZE9 553 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ING2Q9H160 280 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 CATSPERBQ9H7T0 1116 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MRM3Q9HC36 420 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PNPLA8Q9NP80 782 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 DPP3Q9NY33 737 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 AURKCQ9UQB9 309 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF99A8MXY4 864 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 E5RI56 91 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 H3BQ06 376 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 OR2B3O76000 313 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 PRKCGP05129 697 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CSH1P0DML2 217 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CSH2P0DML3 217 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 GZMKP49863 264 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CPT1AP50416 773 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 AP1S2P56377 157 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ALDH6A1Q02252 535 aaKnown RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 SEMA3BQ13214 749 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 IMPG1Q17R60 797 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 DCAF4L1Q3SXM0 396 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 RBM48Q5RL73 367 aaKnown RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 LGSNQ5TDP6 509 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 C9orf131Q5VYM1 1079 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 SLC39A4Q6P5W5 647 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 RAB43Q86YS6 212 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ZMIZ2Q8NF64 920 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 TEX47Q8TBZ9 253 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 FAR1Q8WVX9 515 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 UFD1Q92890 307 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CENPNQ96H22 339 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 MSTO1Q9BUK6 570 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 UNC93B1Q9H1C4 597 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ANKHQ9HCJ1 492 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ZBTB26Q9HCK0 441 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 HPS4Q9NQG7 708 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 RBAKQ9NYW8 714 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 RBPJLQ9UBG7 517 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CD300AQ9UGN4 299 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 PNMA8BQ9ULN7 279 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 TBC1D24Q9ULP9 559 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 USP22Q9UPT9 525 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ACOT9Q9Y305 439 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 COPG1Q9Y678 874 aaKnown RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 TRDMT1O14717 391 aaKnown RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 SLC22A2O15244 555 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 SLC22A5O76082 557 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 PROSCO94903 275 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 TNNC2P02585 160 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 RPL22P35268 128 aaKnown RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 GCLMP48507 274 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 MAP2K6P52564 334 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CUL2Q13617 745 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 FAM110CQ1W6H9 321 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 XKRXQ6PP77 449 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 MFSD7Q6UXD7 560 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 TSPYL5Q86VY4 417 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CNTD1Q8N815 330 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF557Q8N988 423 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 OR10T2Q8NGX3 314 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 PHOSPHO2Q8TCD6 241 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 LHX5Q9H2C1 402 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 PLAC1Q9HBJ0 212 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ENTPD7Q9NQZ7 604 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CHRAC1Q9NRG0 131 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 EHD3Q9NZN3 535 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
CDKL5-201ENST00000379989 GINS2Q9Y248 185 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 DTX4Q9Y2E6 619 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CDY2AQ9Y6F7 541 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 CDY1Q9Y6F8 540 aa7.41□□□□□ -1.22
CDKL5-201ENST00000379989 ZFC3H1O60293 1989 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms