RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TPRG1Q6ZUI0 275 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TCEAL8Q8IYN2 117 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 RGL4Q8IZJ4 473 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TMEM132CQ8N3T6 1108 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 VPS33AQ96AX1 596 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 RIPOR3Q96MK2 946 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 PCDH12Q9NPG4 1184 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 CLDND1Q9NY35 253 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 SLCO3A1Q9UIG8 710 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 NPHS1O60500 1241 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC22A3O75751 556 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 FYNP06241 537 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TPP2P29144 1249 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 STC1P52823 247 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 SEC13P55735 322 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 ERVK-21P61565 698 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TMEM198Q66K66 360 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 MMAAQ8IVH4 418 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 KRT78Q8N1N4 520 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 CLHC1Q8NHS4 586 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 UBE2E3Q969T4 207 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 APOLD1Q96LR9 279 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 DNAJC11Q9NVH1 559 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 NUDT4Q9NZJ9 180 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 ATXN2Q99700 1313 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF839A8K0R7 811 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 A8MT66 165 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 K7ERQ8 282 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC31A1O15431 190 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 ATP6V1E1P36543 226 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 NTHL1P78549 312 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 LMAN2Q12907 356 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 PEX6Q13608 980 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 C16orf72Q14CZ0 275 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC8B1Q6J4K2 584 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 EZH1Q92800 747 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 CXorf40BQ96DE9 158 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 AARSD1Q9BTE6 412 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TEX12Q9BXU0 123 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TFB2MQ9H5Q4 396 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TAS2R1Q9NYW7 299 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF490Q9ULM2 529 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 CCNFP41002 786 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 GNPDA1P46926 289 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 INO80DQ53TQ3 878 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 NET1Q7Z628 596 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 OTULINQ96BN8 352 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 DTNBP1Q96EV8 351 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 AASDHPPTQ9NRN7 309 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 POLR3HQ9Y535 204 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 DEAF1O75398 565 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 LDLRP01130 860 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 MAT2AP31153 395 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 GMPRP36959 345 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 HSPA13P48723 471 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 TTC33Q6PID6 262 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 BRAT1Q6PJG6 821 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 GPR180Q86V85 440 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 AHI1Q8N157 1196 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF786Q8N393 782 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 SPPL2AQ8TCT8 520 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 KLK6Q92876 244 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 SEMA6AQ9H2E6 1030 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 SEC24AO95486 1093 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 FCGR1AP12314 374 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 CCT8P50990 548 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 RIPK1Q13546 671 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 ATP1A4Q13733 1029 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 NRF1Q16656 503 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 CAPN13Q6MZZ7 669 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 RANBP10Q6VN20 620 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 GCNT7Q6ZNI0 430 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 TMEM173Q86WV6 379 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 PHF12Q96QT6 1004 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 EPB41L4BQ9H329 900 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 HPS4Q9NQG7 708 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 EGFL7Q9UHF1 273 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 TSC22D4Q9Y3Q8 395 aa14.03□□□□□ -0.16
SHROOM1-203ENST00000378679 ISM1B1AKI9 464 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 CDC7O00311 574 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 WNT9AO14904 365 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 PIP5K1BO14986 540 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 KCNH1O95259 989 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 PSMC3P17980 439 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 CXCR2P25025 360 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 VITQ6UXI7 678 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 DPY19L3Q6ZPD9 716 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 TMPRSS11BQ86T26 416 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 HPS6Q86YV9 775 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 C2CD4AQ8NCU7 369 aaPredicted RBP14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 ITFG1Q8TB96 612 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 GORASP1Q9BQQ3 440 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 HERC2P3Q9BVR0 1158 aa14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 RIOK2Q9BVS4 552 aaKnown RBP14.02□□□□□ -0.16
SHROOM1-203ENST00000378679 TRIM38O00635 465 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 SGTAO43765 313 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 HPCAL1P37235 193 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 ARSDP51689 593 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms