RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 A3GALT2U3KPV4 340 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ZFC3H1O60293 1989 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NRCAMQ92823 1304 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 H0YIN7 160 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TGM5O43548 720 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 HPRP00739 348 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ASS1P00966 412 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 FCGR1AP12314 374 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 BTF3P20290 206 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PSMA2P25787 234 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 RBL1P28749 1068 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 HOXA13P31271 388 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GP5P40197 560 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ALDH7A1P49419 539 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 LIG4P49917 911 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 AGFG1P52594 562 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CASP6P55212 293 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GNG2P59768 71 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MYL6P60660 151 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 BNIP2Q12982 314 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TFDP2Q14188 446 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SUZ12Q15022 739 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MAPRE2Q15555 327 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TSTQ16762 297 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 FBXO47Q5MNV8 452 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TSTD2Q5T7W7 516 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 USP45Q70EL2 814 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KRT74Q7RTS7 529 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PIWIL3Q7Z3Z3 882 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ZER1Q7Z7L7 766 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GALNT7Q86SF2 657 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GLRX5Q86SX6 157 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 RFX6Q8HWS3 928 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 OR8H3Q8N146 312 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TRPV3Q8NET8 790 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SPPL2BQ8TCT7 592 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 BPIFB1Q8TDL5 484 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 STYXQ8WUJ0 223 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 VPS33AQ96AX1 596 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CGRRF1Q99675 332 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NAT9Q9BTE0 207 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SLA2Q9H6Q3 261 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 OBP2BQ9NPH6 170 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 HPF1Q9NWY4 346 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PKD2L2Q9NZM6 624 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SLC17A6Q9P2U8 582 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 USP18Q9UMW8 372 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KIAA1217Q5T5P2 1943 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 OR5K3A6NET4 321 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 BBIP1A8MTZ0 92 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 H0Y626 953 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 PHGDHO43175 533 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 CHMP2AO43633 222 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 CABYRO75952 493 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 SUPT7LO94864 414 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 OSMP13725 252 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ITGB5P18084 799 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 CCND2P30279 289 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 YWHABP31946 246 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 SHMT2P34897 504 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 GPD2P43304 727 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 RPS9P46781 194 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 RAD23AP54725 363 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 DNAJB13P59910 316 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 PRAMEP78395 509 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ALDH6A1Q02252 535 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 CLN3Q13286 438 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 POU6F1Q14863 301 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 PDCD1Q15116 288 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 PSMD5Q16401 504 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ADPRMQ3LIE5 342 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 HSDL1Q3SXM5 330 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 CRY2Q49AN0 593 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ARL13AQ5H913 290 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 COQ5Q5HYK3 327 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 BRMS1LQ5PSV4 323 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 CDCP2Q5VXM1 449 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 TRNP1Q6NT89 227 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ADAMTSL4Q6UY14 1074 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ERO1BQ86YB8 467 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 CLIP4Q8N3C7 705 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 DHRSXQ8N5I4 330 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ASCC1Q8N9N2 400 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 KCTD6Q8NC69 237 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 TFAP2BQ92481 460 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 QKIQ96PU8 341 aaKnown RBP eCLIP6.62□□□□□ -1.352e-8■■■■□ 26.7
CDKAL1-202ENST00000378610 CDK5RAP1Q96SZ6 601 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 ALOXE3Q9BYJ1 711 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 LRRC4Q9HBW1 653 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 TBC1D13Q9NVG8 400 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 DTLQ9NZJ0 730 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 SLCO3A1Q9UIG8 710 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 TUBD1Q9UJT1 453 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 FBXO5Q9UKT4 447 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 DSEQ9UL01 958 aa6.62□□□□□ -1.35
CDKAL1-202ENST00000378610 OAZ3Q9UMX2 235 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms